RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 NR1D2Q14995 579 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 ACAD11Q709F0 780 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 DHDDSQ86SQ9 333 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 MRPS26Q9BYN8 205 aaKnown RBP10.78□□□□□ -0.68
CD28-202ENST00000374481 FOXP3Q9BZS1 431 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 ATP8A2Q9NTI2 1148 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 FBXO9Q9UK97 447 aaPredicted RBP10.78□□□□□ -0.68
CD28-202ENST00000374481 SOX13Q9UN79 622 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 COQ6Q9Y2Z9 468 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 MYOM1P52179 1685 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 QRICH2Q9H0J4 1663 aa10.78□□□□□ -0.68
CD28-202ENST00000374481 C15orf38-AP3S2A0A0A6YYH1 394 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 GOLGA8CPA6NN73 597 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 H0Y626 953 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 IRS4O14654 1257 aaPredicted RBP10.77□□□□□ -0.68
CD28-202ENST00000374481 CRCPO75575 148 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 RPS6P62753 249 aaKnown RBP10.77□□□□□ -0.68
CD28-202ENST00000374481 IL1RL1Q01638 556 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 PABPC4Q13310 644 aaKnown RBP eCLIP10.77□□□□□ -0.68
CD28-202ENST00000374481 ZNF618Q5T7W0 954 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 ARPINQ7Z6K5 226 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 NLRP10Q86W26 655 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 NUP85Q9BW27 656 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 YIPF2Q9BWQ6 316 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 ZMYND8Q9ULU4 1186 aaPredicted RBP10.77□□□□□ -0.68
CD28-202ENST00000374481 OVOS2A0A0G2JMS6 1433 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 SALL1Q9NSC2 1324 aa10.77□□□□□ -0.68
CD28-202ENST00000374481 TBKBP1A7MCY6 615 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 PRKAB2O43741 272 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 JAK1P23458 1154 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 INPP1P49441 399 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 MFAP3P55082 362 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 STX1BP61266 288 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 HIF1AQ16665 826 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 PACS1Q6VY07 963 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 RIPOR1Q6ZS17 1223 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 CYGBQ8WWM9 190 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 ADNPQ9H2P0 1102 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 RPAP3Q9H6T3 665 aaPredicted RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 ARHGEF35A5YM69 484 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 KLRF2D3W0D1 207 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 H7C0C1 242 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 GNGT2O14610 69 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 RPL21P46778 160 aaKnown RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 ATP5OP48047 213 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 DEFA1P59665 94 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 DEFA3P59666 94 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 BPIFB4P59827 614 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 TUBA4AP68366 448 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 COL9A3Q14050 684 aaPredicted RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 HADHQ16836 314 aaKnown RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 ARHGAP27Q6ZUM4 889 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 SLCO1B3Q9NPD5 702 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 ANGPTL3Q9Y5C1 460 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 POTECB2RU33 542 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 AKAP10O43572 662 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 TMEM253P0C7T8 217 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 TCN1P20061 433 aaPredicted RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 NET1Q7Z628 596 aaPredicted RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 HORMAD1Q86X24 394 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 PEX5LQ8IYB4 626 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 ZCCHC7Q8N3Z6 543 aaKnown RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 ZC3H15Q8WU90 426 aaKnown RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 E2F7Q96AV8 911 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 BRIP1Q9BX63 1249 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 TRIM15Q9C019 465 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 MYRFQ9Y2G1 1151 aa10.77□□□□□ -0.69
CD28-202ENST00000374481 CDK12Q9NYV4 1490 aaPredicted RBP10.77□□□□□ -0.69
CD28-202ENST00000374481 SOX5P35711 763 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 ARSEP51690 589 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 COASYQ13057 564 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 TSPAN14Q8NG11 270 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 RSPH1Q8WYR4 309 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 HPS1Q92902 700 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 CCDC127Q96BQ5 260 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 FAM111AQ96PZ2 611 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 TRPC7Q9HCX4 862 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 DDX25Q9UHL0 483 aaKnown RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 RABL2BQ9UNT1 228 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 UBE2Q2LH0YL09 131 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 GSC2O15499 205 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 ABL2P42684 1182 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 PLOD1Q02809 727 aaPredicted RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 EGFLAMQ63HQ2 1017 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 PPP1R2P3Q6NXS1 205 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 DPH6Q7L8W6 267 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 KRT27Q7Z3Y8 459 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 SLC13A5Q86YT5 568 aaPredicted RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 ZNF75CPQ92670 426 aaPredicted RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 BHMTQ93088 406 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 PBXIP1Q96AQ6 731 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 OXNAD1Q96HP4 312 aaPredicted RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 TMEM79Q9BSE2 394 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 MXD3Q9BW11 206 aa10.76□□□□□ -0.69
CD28-202ENST00000374481 DDX56Q9NY93 547 aaKnown RBP10.76□□□□□ -0.69
CD28-202ENST00000374481 AURKCQ9UQB9 309 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms