RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 PDCL3Q9H2J4 239 aa18.08■□□□□ 0.49
PTPN20-203ENST00000374342 CDHR5Q9HBB8 845 aa18.08■□□□□ 0.49
PTPN20-203ENST00000374342 A0A1B0GUA9 196 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 C17orf102A2RUQ5 167 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 DUSP11O75319 330 aaKnown RBP18.08■□□□□ 0.48
PTPN20-203ENST00000374342 PRKCZQ05513 592 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 DCAF4L1Q3SXM0 396 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 NT5DC3Q86UY8 548 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 PNKPQ96T60 521 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 XYLT2Q9H1B5 865 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 CHORDC1Q9UHD1 332 aaPredicted RBP18.08■□□□□ 0.48
PTPN20-203ENST00000374342 AMFRQ9UKV5 643 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.48
PTPN20-203ENST00000374342 SCN10AQ9Y5Y9 1956 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 THAP12O43422 761 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 ADAM17P78536 824 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 CDC42EP1Q00587 391 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 NOGQ13253 232 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 TMEM132DQ14C87 1099 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 SLC10A6Q3KNW5 377 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 CFAP221Q4G0U5 840 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 ACAD10Q6JQN1 1059 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 C7orf31Q8N865 590 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 SIX4Q9UIU6 781 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 GTF3C4Q9UKN8 822 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 CNTN6Q9UQ52 1028 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
PTPN20-203ENST00000374342 TMEM110-MUSTN1A8MSY1 372 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 ITGB3P05106 788 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 DARSP14868 501 aaKnown RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 SSTR3P32745 418 aaPredicted RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 ASPAP45381 313 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 ZNF132P52740 706 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 HADHBP55084 474 aaKnown RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 NAA35Q5VZE5 725 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 PASD1Q8IV76 773 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 SPATA4Q8NEY3 305 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 ACAP3Q96P50 834 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 NUP85Q9BW27 656 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 ASB7Q9H672 318 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 UNGP13051 313 aaPredicted RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 GRM5P41594 1212 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 POU5F1Q01860 360 aaKnown RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 TRIM32Q13049 653 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 TCEAL1Q15170 157 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 APBB1IPQ7Z5R6 666 aaPredicted RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 ZNF564Q8TBZ8 553 aaPredicted RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 CPA5Q8WXQ8 436 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 CISHQ9NSE2 258 aa18.06■□□□□ 0.48
PTPN20-203ENST00000374342 NXF1Q9UBU9 619 aaKnown RBP18.06■□□□□ 0.48
PTPN20-203ENST00000374342 CYP1A2P05177 515 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 CFHP08603 1231 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 WEE2P0C1S8 567 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 HOXA11P31270 313 aaPredicted RBP18.05■□□□□ 0.48
PTPN20-203ENST00000374342 NSFP46459 744 aaKnown RBP18.05■□□□□ 0.48
PTPN20-203ENST00000374342 ITIH3Q06033 890 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 ZNF667Q5HYK9 610 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 GNASQ5JWF2 1037 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 C11orf63Q6NUN7 778 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 NOTUMQ6P988 496 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 SLC27A1Q6PCB7 646 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 TMCO3Q6UWJ1 677 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 CCDC94Q9BW85 323 aaPredicted RBP18.05■□□□□ 0.48
PTPN20-203ENST00000374342 ABCB6Q9NP58 842 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 RNF14Q9UBS8 474 aa18.05■□□□□ 0.48
PTPN20-203ENST00000374342 CNOT8Q9UFF9 292 aaKnown RBP18.05■□□□□ 0.48
PTPN20-203ENST00000374342 CES2O00748 559 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 PGK1P00558 417 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 RAP1GAPP47736 663 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 GUCY2FP51841 1108 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 GJA9P57773 515 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 RNASE9P60153 205 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CENPCQ03188 943 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 SNX17Q15036 470 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 ZNF394Q53GI3 561 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 TRIM72Q6ZMU5 477 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 HES6Q96HZ4 224 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 PBKQ96KB5 322 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CAPNS2Q96L46 248 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 MTG1Q9BT17 334 aaPredicted RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 EIF2AQ9BY44 585 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 ZNF446Q9NWS9 450 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 THSD7BQ9C0I4 1608 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CEP104O60308 925 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 MTA2O94776 668 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 SEC31AO94979 1220 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 GNAT1P11488 350 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 EIF4BP23588 611 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 POLR2BP30876 1174 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 YWHAEP62258 255 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CCDC70Q6NSX1 233 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 MMGT1Q8N4V1 131 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 TMEM40Q8WWA1 233 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CYFIP2Q96F07 1278 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
PTPN20-203ENST00000374342 CALR3Q96L12 384 aaKnown RBP18.04■□□□□ 0.48
PTPN20-203ENST00000374342 RBM12Q9NTZ6 932 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms