RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SLC37A4O43826 429 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 MAGEC1O60732 1142 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 DNAJC6O75061 913 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 CAMTA2O94983 1202 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 FUT4P22083 530 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 CA4P22748 312 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 VARSP26640 1264 aaKnown RBP13.67□□□□□ -0.22
PRPF4-201ENST00000374198 TM4SF1P30408 202 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
PRPF4-201ENST00000374198 KRT72Q14CN4 511 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 NET1Q7Z628 596 aaPredicted RBP13.67□□□□□ -0.22
PRPF4-201ENST00000374198 DIS3LQ8TF46 1054 aaKnown RBP13.67□□□□□ -0.22
PRPF4-201ENST00000374198 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 TTC1Q99614 292 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 WNT8AQ9H1J5 351 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
PRPF4-201ENST00000374198 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
PRPF4-201ENST00000374198 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 PDE8AO60658 829 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 BAG2O95816 211 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 CD97P48960 835 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GALK1P51570 392 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 EMP3P54852 163 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GPSM2P81274 684 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 DNAJC14Q6Y2X3 702 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 DGKHQ86XP1 1220 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 PALB2Q86YC2 1186 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 PDSS2Q86YH6 399 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 OR6Y1Q8NGX8 325 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SLC35C1Q96A29 364 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 OSBPL8Q9BZF1 889 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 KIAA1586Q9HCI6 787 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 TIMMDC1Q9NPL8 285 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 TRAF3IP3Q9Y228 551 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 C10orf71Q711Q0 1435 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 A0A0G2JND7 137 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 AKAP3O75969 853 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 ZFXP17010 805 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GJA8P48165 433 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 VPS41P49754 854 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 OVGP1Q12889 678 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 DRAP1Q14919 205 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 MAPK6Q16659 721 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SYDE2Q5VT97 1194 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 RIPOR1Q6ZS17 1223 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 C4orf33Q8N1A6 199 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 PRR11Q96HE9 360 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 MAGEB3O15480 346 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SORBS3O60504 671 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 IDO1P14902 403 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GCAP28676 217 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GTF2H1P32780 548 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 ZBTB16Q05516 673 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 ASPHQ12797 758 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 DCTN2Q13561 401 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 PTK6Q13882 451 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 MESDQ14696 234 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SH3D19Q5HYK7 790 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 RAPH1Q70E73 1250 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 GAB3Q8WWW8 586 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 CD101Q93033 1021 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 SKA1Q96BD8 255 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 CYTH2Q99418 400 aa13.66□□□□□ -0.22
PRPF4-201ENST00000374198 OXCT2Q9BYC2 517 aaPredicted RBP13.66□□□□□ -0.22
PRPF4-201ENST00000374198 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 EXOC1LA0A1B0GW35 172 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 USP1O94782 785 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 SERPINB2P05120 415 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 ATF2P15336 505 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 YY1P25490 414 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 ACTR3P61158 418 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TRIP13Q15645 432 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 TRMT5Q32P41 509 aaKnown RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 LVRNQ6Q4G3 990 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 RBM44Q6ZP01 1051 aaKnown RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 PRICKLE1Q96MT3 831 aaPredicted RBP13.65□□□□□ -0.22
PRPF4-201ENST00000374198 PANX3Q96QZ0 392 aa13.65□□□□□ -0.22
PRPF4-201ENST00000374198 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms