RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 TWF2Q6IBS0 349 aaKnown RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 PID1Q7Z2X4 250 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 TRIML2Q8N7C3 387 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 DACT3Q96B18 629 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-204ENST00000373380 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 CBWD1Q9BRT8 395 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 SLC40A1Q9NP59 571 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 UBN1Q9NPG3 1134 aa11.48□□□□□ -0.57
CSMD2-204ENST00000373380 MRC1P22897 1456 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 GNGT2O14610 69 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 KCNN4O15554 427 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 KRT10P13645 584 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 PGM1P36871 562 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 KPNA2P52292 529 aaKnown RBP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 NME3Q13232 169 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 HABP4Q5JVS0 413 aaKnown RBP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 CBWD2Q8IUF1 395 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 ST13P4Q8IZP2 240 aaPredicted RBP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 SPATA33Q96N06 139 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 AGAP3Q96P47 875 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 CENPKQ9BS16 269 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 GTSE1Q9NYZ3 720 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 CST8O60676 142 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 TMTC4Q5T4D3 741 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 SLC30A9Q6PML9 568 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 C3orf62Q6ZUJ4 267 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 RSPH3Q86UC2 560 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 RCOR2Q8IZ40 523 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 EPS8L3Q8TE67 593 aaKnown RBP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 SIK2Q9H0K1 926 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSMD2-204ENST00000373380 SPATA31A1Q5TZJ5 1347 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 CCDC78A2IDD5 438 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 ATP9BO43861 1147 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 SGPL1O95470 568 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 RBP3P10745 1247 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 ACTR2P61160 394 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 LRRC36Q1X8D7 754 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 RAPGEF5Q92565 580 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 KIF12Q96FN5 646 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 RIT2Q99578 217 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 TLR10Q9BXR5 811 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 RAB21Q9UL25 225 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 AGAP1Q9UPQ3 857 aa11.47□□□□□ -0.57
CSMD2-204ENST00000373380 CAND2O75155 1236 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 PRKCBP05771 671 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 ENO1P06733 434 aaKnown RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 TAL1P17542 331 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 CDK17Q00537 523 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 KDM7AQ6ZMT4 941 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 SGSM3Q96HU1 749 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 FGD4Q96M96 766 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 TMEM8AQ9HCN3 771 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 KCND2Q9NZV8 630 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 TNFAIP2Q03169 654 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 RNF135Q8IUD6 432 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 CYP2W1Q8TAV3 490 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 SLC10A4Q96EP9 437 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 PPP1R36Q96LQ0 422 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 CCDC138Q96M89 665 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 ZSWIM1Q9BR11 485 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 POLR3CQ9BUI4 534 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 UPF3AQ9H1J1 476 aaKnown RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 ZFATQ9P243 1243 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.57
CSMD2-204ENST00000373380 SMG5Q9UPR3 1016 aaKnown RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.46□□□□□ -0.57
CSMD2-204ENST00000373380 ENTPD3O75355 529 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 ALDH18A1P54886 795 aaKnown RBP11.46□□□□□ -0.58
CSMD2-204ENST00000373380 RPS6P62753 249 aaKnown RBP11.46□□□□□ -0.58
CSMD2-204ENST00000373380 FSCBQ5H9T9 825 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 FOXR1Q6PIV2 292 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 TSSK1BQ9BXA7 367 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 EHD4Q9H223 541 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 CD248Q9HCU0 757 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 NDE1Q9NXR1 346 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 ZBTB7AO95365 584 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 ARP10275 920 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 PRKCEQ02156 737 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 COG2Q14746 738 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 KIF19Q2TAC6 998 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 SYDE1Q6ZW31 735 aaPredicted RBP11.46□□□□□ -0.58
CSMD2-204ENST00000373380 SCN4BQ8IWT1 228 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 TEX13BQ9BXU2 312 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 ZC3H7BQ9UGR2 993 aaKnown RBP11.46□□□□□ -0.58
CSMD2-204ENST00000373380 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.58
CSMD2-204ENST00000373380 KPNA7A9QM74 516 aa11.45□□□□□ -0.58
CSMD2-204ENST00000373380 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
CSMD2-204ENST00000373380 WDR46O15213 610 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms