RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 FBXW10Q5XX13 1052 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 MCTP2Q6DN12 878 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 SPOPLQ6IQ16 392 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 ZDHHC24Q6UX98 284 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 KDM7AQ6ZMT4 941 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 PRUNE1Q86TP1 453 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 PAF1Q8N7H5 531 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 PRELID2Q8N945 189 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 XXYLT1Q8NBI6 393 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 FLAD1Q8NFF5 587 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 POMGNT1Q8WZA1 660 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 RUBCNQ92622 972 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 ZFRQ96KR1 1074 aaKnown RBP6.84□□□□□ -1.32
CHD6-202ENST00000373222 PWWP2AQ96N64 755 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 RIT2Q99578 217 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 MTFR1LQ9H019 292 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.32
CHD6-202ENST00000373222 GGT7Q9UJ14 662 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 UBIAD1Q9Y5Z9 338 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 COL2A1P02458 1487 aaPredicted RBP6.84□□□□□ -1.32
CHD6-202ENST00000373222 DENND3A2RUS2 1198 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SCGB1D2O95969 90 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 ASNSP08243 561 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 FGFR4P22455 802 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 CNGA1P29973 690 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SLCO1A2P46721 670 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 RPL21P46778 160 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 PTENP60484 403 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 MAGOHP61326 146 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 DR1Q01658 176 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 PTPRJQ12913 1337 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 BAATQ14032 418 aaPredicted RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 PTGISQ16647 500 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 NFIL3Q16649 462 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 IFI16Q16666 785 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 EML3Q32P44 896 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 DALRD3Q5D0E6 543 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 ZBTB41Q5SVQ8 909 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 MICALL1Q8N3F8 863 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 TMEM161BQ8NDZ6 487 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 ATG4AQ8WYN0 398 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 MAGOHBQ96A72 148 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 PDCD2LQ9BRP1 358 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 CFHR5Q9BXR6 569 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 RPAP3Q9H6T3 665 aaPredicted RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 AS3MTQ9HBK9 375 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SLC38A10Q9HBR0 1119 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 MYOZ2Q9NPC6 264 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 ZDHHC18Q9NUE0 388 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SLC12A6Q9UHW9 1150 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 EBAG9O00559 213 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 CES2O00748 559 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 EDN1P05305 212 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 MYZAPP0CAP1 466 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 NF2P35240 595 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 MDH1P40925 334 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 PEX5P50542 639 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 GTF2BQ00403 316 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SNX1Q13596 522 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 PRKG1Q13976 671 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 RAB33AQ14088 237 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 TRIP13Q15645 432 aaPredicted RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 TMEM95Q3KNT9 176 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 KRT71Q3SY84 523 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 CCDC38Q502W7 563 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 PCNX4Q63HM2 1172 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 INTS8Q75QN2 995 aaKnown RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 FAM160B2Q86V87 743 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 CD302Q8IX05 232 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SYCE1Q8N0S2 351 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 MYCBPAPQ8TBZ2 947 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 PARD3BQ8TEW8 1205 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 C1orf54Q8WWF1 131 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 ZBTB45Q96K62 511 aaPredicted RBP6.83□□□□□ -1.32
CHD6-202ENST00000373222 ACCSQ96QU6 501 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 NUP85Q9BW27 656 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 SEMA4AQ9H3S1 761 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 PXMP2Q9NR77 195 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 GRHL1Q9NZI5 618 aa6.83□□□□□ -1.32
CHD6-202ENST00000373222 KAT6AQ92794 2004 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 MCM3APO60318 1980 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 CLDN3O15551 220 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 BCRP11274 1271 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 WEE1P30291 646 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 PTGIRP43119 386 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 IFI35P80217 286 aaPredicted RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 CUL1Q13616 776 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 ODF2Q5BJF6 829 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 DUPD1Q68J44 220 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 SWSAP1Q6NVH7 229 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 RNF207Q6ZRF8 634 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 PASD1Q8IV76 773 aa6.82□□□□□ -1.32
CHD6-202ENST00000373222 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
CHD6-202ENST00000373222 FAM71AQ8IYT1 594 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms