RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 COL4A6Q14031 1691 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 TBKBP1A7MCY6 615 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 GJB5O95377 273 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 PAX3P23760 479 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 KLK7P49862 253 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 MYL6P60660 151 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 RNASELQ05823 741 aaKnown RBP17.05■□□□□ 0.32
TMEM53-204ENST00000372243 TRIM14Q14142 442 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 PTPN21Q16825 1174 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 FAM81BQ96LP2 452 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 LSM14BQ9BX40 385 aaKnown RBP17.05■□□□□ 0.32
TMEM53-204ENST00000372243 EDEM3Q9BZQ6 932 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-204ENST00000372243 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
TMEM53-204ENST00000372243 LRRN2O75325 713 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 NOL4O94818 638 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 DDHD2O94830 711 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
TMEM53-204ENST00000372243 GATMP50440 423 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 HTRA4P83105 476 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-204ENST00000372243 MYO1EQ12965 1108 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 UPP1Q16831 310 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 ZNF699Q32M78 642 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 SCARA3Q6AZY7 606 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 SMYD5Q6GMV2 418 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 TMC6Q7Z403 805 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 COLGALT2Q8IYK4 626 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
TMEM53-204ENST00000372243 ZNF560Q96MR9 790 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 NT5C1BQ96P26 610 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 FAM193BQ96PV7 902 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-204ENST00000372243 TTYH3Q9C0H2 523 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 GANQ9H2C0 597 aa17.04■□□□□ 0.32
TMEM53-204ENST00000372243 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-204ENST00000372243 A0A1W2PQJ5 194 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 PODXLO00592 558 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 UCHL3P15374 230 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 CLCNKBP51801 687 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
TMEM53-204ENST00000372243 GCNT1Q02742 428 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-204ENST00000372243 PHLDB3Q6NSJ2 640 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 ZNF280BQ86YH2 543 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 HPDLQ96IR7 371 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 PDLIM2Q96JY6 352 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 GDF15Q99988 308 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 TMEM175Q9BSA9 504 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 PI4K2AQ9BTU6 479 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 CEP72Q9P209 647 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 IMPACTQ9P2X3 320 aa17.03■□□□□ 0.32
TMEM53-204ENST00000372243 CARNS1A5YM72 827 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 TMEM189-UBE2V1I3L0A0 370 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 TAF6P49848 677 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 SV2CQ496J9 727 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 ZNF667Q5HYK9 610 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 DCLRE1AQ6PJP8 1040 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 HERC6Q8IVU3 1022 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 DRC7Q8IY82 874 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 TMEM130Q8N3G9 435 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 NAA15Q9BXJ9 866 aaKnown RBP17.02■□□□□ 0.32
TMEM53-204ENST00000372243 NRDE2Q9H7Z3 1164 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 APOBEC3GQ9HC16 384 aaKnown RBP17.02■□□□□ 0.32
TMEM53-204ENST00000372243 NUB1Q9Y5A7 615 aa17.02■□□□□ 0.32
TMEM53-204ENST00000372243 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 PPEF2O14830 753 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 EPHB6O15197 1021 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 GYPCP04921 128 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 P4HA1P13674 534 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 ATP2A2P16615 1042 aaKnown RBP17.02■□□□□ 0.31
TMEM53-204ENST00000372243 TBXAS1P24557 533 aaPredicted RBP17.02■□□□□ 0.31
TMEM53-204ENST00000372243 LILRA4P59901 499 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 TMCO2Q7Z6W1 182 aaPredicted RBP17.02■□□□□ 0.31
TMEM53-204ENST00000372243 TATDN2Q93075 761 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 YME1L1Q96TA2 773 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 NIF3L1Q9GZT8 377 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 FAM124BQ9H5Z6 455 aaPredicted RBP17.02■□□□□ 0.31
TMEM53-204ENST00000372243 GDAP2Q9NXN4 497 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 CAPN11Q9UMQ6 739 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 INSL6Q9Y581 213 aa17.02■□□□□ 0.31
TMEM53-204ENST00000372243 SCN1AP35498 2009 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 B4GALT3O60512 393 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 ALDH2P05091 517 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 TPM1P09493 284 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 AARSP49588 968 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMEM53-204ENST00000372243 MFAP3P55082 362 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 POLR2FP61218 127 aaKnown RBP17.01■□□□□ 0.31
TMEM53-204ENST00000372243 APBA1Q02410 837 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 LRMPQ12912 555 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 BTG3Q14201 252 aaPredicted RBP17.01■□□□□ 0.31
TMEM53-204ENST00000372243 PAN2Q504Q3 1202 aaKnown RBP17.01■□□□□ 0.31
TMEM53-204ENST00000372243 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 FAM117BQ6P1L5 589 aa17.01■□□□□ 0.31
TMEM53-204ENST00000372243 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms