RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 PLXNA4Q9HCM2 1894 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 I3L4J1 428 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 PIRO00625 290 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 TADA2AO75478 443 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 CSPG5O95196 566 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-203ENST00000372242 C4BPAP04003 597 aaKnown RBP17.62■□□□□ 0.41
TMEM53-203ENST00000372242 MARSP56192 900 aaKnown RBP17.62■□□□□ 0.41
TMEM53-203ENST00000372242 MCCD1P59942 119 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-203ENST00000372242 BIRC3Q13489 604 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 SV2AQ7L0J3 742 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 GDPD5Q8WTR4 605 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 C11orf84Q9BUA3 381 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-203ENST00000372242 VN1R3Q9BXE9 311 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 TSPY26PQ9H489 355 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 CBX8Q9HC52 389 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 ITGA11Q9UKX5 1188 aa17.62■□□□□ 0.41
TMEM53-203ENST00000372242 KCNJ18B7U540 433 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 PHACTR2O75167 634 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 RB1P06400 928 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 BRCC3P46736 316 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 KCNJ12Q14500 433 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 IQCB1Q15051 598 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 CDKAL1Q5VV42 579 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 LUZP1Q86V48 1076 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 GPR62Q9BZJ7 368 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 HSD3B7Q9H2F3 369 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 MAGEC2Q9UBF1 373 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-203ENST00000372242 NUB1Q9Y5A7 615 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.61■□□□□ 0.41
TMEM53-203ENST00000372242 H3BNC9 293 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 SPTLC1O15269 473 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 GRM6O15303 877 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 VNN1O95497 513 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 DNAJB1P25685 340 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 MTIF2P46199 727 aaKnown RBP17.61■□□□□ 0.41
TMEM53-203ENST00000372242 AP3M2P53677 418 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 ZNF445P59923 1031 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 KRT17Q04695 432 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 ENPEPQ07075 957 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 GPM6BQ13491 265 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 GRIN2CQ14957 1233 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 ZACNQ401N2 412 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 CBWD6Q4V339 395 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 CBWD3Q5JTY5 395 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 CBWD5Q5RIA9 395 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 ZNF697Q5TEC3 545 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 C15orf39Q6ZRI6 1047 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 TAS1R1Q7RTX1 841 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 SPPL3Q8TCT6 385 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 PRDM12Q9H4Q4 367 aa17.61■□□□□ 0.41
TMEM53-203ENST00000372242 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-203ENST00000372242 SCN1AP35498 2009 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 BECN2A8MW95 431 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 TMEM189-UBE2V1I3L0A0 370 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 LILRA4P59901 499 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 RBP5P82980 135 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 PLCB3Q01970 1234 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 TCP11X2Q5H9J9 407 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 FUT10Q6P4F1 479 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 Q7L0L9 218 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 TMEM8AQ9HCN3 771 aa17.6■□□□□ 0.41
TMEM53-203ENST00000372242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.6■□□□□ 0.41
TMEM53-203ENST00000372242 R3HCC1Q9Y3T6 440 aaKnown RBP17.6■□□□□ 0.41
TMEM53-203ENST00000372242 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 CARNS1A5YM72 827 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 LRRN2O75325 713 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 MXI1P50539 228 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
TMEM53-203ENST00000372242 MYL6P60660 151 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 KCNH2Q12809 1159 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 TRPC3Q13507 836 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 TIGD5Q53EQ6 642 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 KRT39Q6A163 491 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 DDX53Q86TM3 631 aaKnown RBP17.59■□□□□ 0.41
TMEM53-203ENST00000372242 TAS1R2Q8TE23 839 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 POF1BQ8WVV4 589 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 SF3B1O75533 1304 aaKnown RBP eCLIP17.59■□□□□ 0.41
TMEM53-203ENST00000372242 COL4A4P53420 1690 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-203ENST00000372242 MYO9BQ13459 2157 aa17.59■□□□□ 0.41
TMEM53-203ENST00000372242 SMTNL1A8MU46 457 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 STX10O60499 249 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 LPXNO60711 386 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 ATP1A3P13637 1013 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 GTF2H1P32780 548 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 FMO5P49326 533 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 TAF6P49848 677 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 NCOA4Q13772 614 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 CAMK1Q14012 370 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 VPS52Q8N1B4 723 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 FAM200AQ8TCP9 573 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 HPDLQ96IR7 371 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 TUBGCP2Q9BSJ2 902 aa17.58■□□□□ 0.41
TMEM53-203ENST00000372242 CAVIN2O95810 425 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 EFEMP2O95967 443 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 HLA-DRAP01903 254 aa17.58■□□□□ 0.4
TMEM53-203ENST00000372242 PRKCSHP14314 528 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms