RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CCNYL1Q8N7R7 359 aa15.52■□□□□ 0.08
NDC1-201ENST00000371429 PBXIP1Q96AQ6 731 aa15.52■□□□□ 0.08
NDC1-201ENST00000371429 DCUN1D1Q96GG9 259 aa15.52■□□□□ 0.08
NDC1-201ENST00000371429 SLC4A9Q96Q91 983 aa15.52■□□□□ 0.08
NDC1-201ENST00000371429 ABHD16BQ9H3Z7 469 aa15.52■□□□□ 0.08
NDC1-201ENST00000371429 AFF4Q9UHB7 1163 aaKnown RBP15.52■□□□□ 0.08
NDC1-201ENST00000371429 FAM187AA6NFU0 413 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 KCNN4O15554 427 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 NPTX2P47972 431 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 COPS2P61201 443 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 ART3Q13508 389 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 IZUMO3Q5VZ72 239 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 MPZL3Q6UWV2 235 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 SLC35G2Q8TBE7 412 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 SNX19Q92543 992 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 AGAP3Q96P47 875 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 AGPAT5Q9NUQ2 364 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 HDAC6Q9UBN7 1215 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 RSPH10B2B2RC85 870 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 EEF2KO00418 725 aaKnown RBP15.52■□□□□ 0.07
NDC1-201ENST00000371429 RSPH10BP0C881 870 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 ADORA2AP29274 412 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 SESN3P58005 492 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 IFT88Q13099 833 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 SPARCL1Q14515 664 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 HABP4Q5JVS0 413 aaKnown RBP15.52■□□□□ 0.07
NDC1-201ENST00000371429 TRAPPC11Q7Z392 1133 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 CHP1Q99653 195 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 TMEM117Q9H0C3 514 aa15.52■□□□□ 0.07
NDC1-201ENST00000371429 TCRBV5S4A2TA0A5A2 114 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
NDC1-201ENST00000371429 NCAM1P13591 858 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 SESN2P58004 480 aaPredicted RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 TDRD10Q5VZ19 366 aaKnown RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 ATP11CQ8NB49 1132 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 SOCS4Q8WXH5 440 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 SNF8Q96H20 258 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 DRC3Q9H069 523 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 SETD4Q9NVD3 440 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
NDC1-201ENST00000371429 HMGB1P1B2RPK0 211 aaPredicted RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 ZNF286BP0CG31 522 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 AKR1A1P14550 325 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 NR1H3Q13133 447 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 GPRC5DQ9NZD1 345 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 A0A1B0GUA9 196 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 ESYT3A0FGR9 886 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 OAZ1P54368 228 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 USP33Q8TEY7 942 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 L3MBTL3Q96JM7 780 aaPredicted RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 AGO4Q9HCK5 861 aaKnown RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 DISP2A7MBM2 1401 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 AK9Q5TCS8 1911 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 TTC36A6NLP5 189 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 RAG1P15918 1043 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 MTF1Q14872 753 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 PGM5Q15124 567 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 AMHR2Q16671 573 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 LY6KQ17RY6 165 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 KIF19Q2TAC6 998 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 ATL2Q8NHH9 583 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 GTSE1Q9NYZ3 720 aa15.51■□□□□ 0.07
NDC1-201ENST00000371429 TSR3Q9UJK0 312 aaKnown RBP15.51■□□□□ 0.07
NDC1-201ENST00000371429 H7C4K7 107 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 Q4G0T1 1027 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 NUGGCQ68CJ6 796 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 SHCBP1Q8NEM2 672 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 OSMRQ99650 979 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 MTG1Q9BT17 334 aaPredicted RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 LRRC4BQ9NT99 713 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 A0A087WUV0 522 aaPredicted RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 A0A087WZ62 844 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 TMEM247A6NEH6 219 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 INSRRP14616 1297 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 IMPG1Q17R60 797 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 EPC2Q52LR7 807 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 SZRD1Q7Z422 152 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 C4orf19Q8IY42 314 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 PDZD8Q8NEN9 1154 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 FDXACB1Q9BRP7 624 aaPredicted RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 FZD1Q9UP38 647 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 VWDEQ8N2E2 1590 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 CFLARO15519 480 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 BRD2P25440 801 aaKnown RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 PMS2P54278 862 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 TMEM132BQ14DG7 1078 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 RASSF3Q86WH2 238 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 ATP8B4Q8TF62 1192 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 XPNPEP3Q9NQH7 507 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 USH1CQ9Y6N9 552 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 ACO1P21399 889 aaKnown RBP15.5■□□□□ 0.07
NDC1-201ENST00000371429 CLCN6P51797 869 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 CBWD2Q8IUF1 395 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 ARHGAP18Q8N392 663 aa15.5■□□□□ 0.07
NDC1-201ENST00000371429 UBE2Q2Q8WVN8 375 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms