RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
TCTN3-202ENST00000371209 GOLGA2P5Q9HBQ8 144 aa11.31□□□□□ -0.6
TCTN3-202ENST00000371209 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
TCTN3-202ENST00000371209 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
TCTN3-202ENST00000371209 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
TCTN3-202ENST00000371209 SIX4Q9UIU6 781 aa11.31□□□□□ -0.6
TCTN3-202ENST00000371209 R3HCC1Q9Y3T6 440 aaKnown RBP11.31□□□□□ -0.6
TCTN3-202ENST00000371209 PPEF2O14830 753 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 PMM2O15305 246 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 HOXA2O43364 376 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 HLA-DRAP01903 254 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 TNNC2P02585 160 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 ITGB3P05106 788 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 THP07101 528 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 IGFBP6P24592 240 aaPredicted RBP11.3□□□□□ -0.6
TCTN3-202ENST00000371209 ZNF75DP51815 510 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 AP3M2P53677 418 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 APBA1Q02410 837 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 GRIK3Q13003 919 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 BIRC3Q13489 604 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 FILIP1LQ4L180 1135 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 EPC2Q52LR7 807 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 ZNF280BQ86YH2 543 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 LMO3Q8TAP4 145 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 URGCPQ8TCY9 931 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
TCTN3-202ENST00000371209 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 TSPAN18Q96SJ8 248 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 GDF15Q99988 308 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 CRACR2AQ9BSW2 395 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 TRIM5Q9C035 493 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
TCTN3-202ENST00000371209 DPP3Q9NY33 737 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 UBQLN1Q9UMX0 589 aaKnown RBP11.3□□□□□ -0.6
TCTN3-202ENST00000371209 LHX6Q9UPM6 363 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 COQ4Q9Y3A0 265 aa11.3□□□□□ -0.6
TCTN3-202ENST00000371209 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
TCTN3-202ENST00000371209 TBKBP1A7MCY6 615 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 P4HA2O15460 535 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
TCTN3-202ENST00000371209 DDHD2O94830 711 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
TCTN3-202ENST00000371209 SLC9A1P19634 815 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 CYP3A5P20815 502 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 POLR2BP30876 1174 aaKnown RBP11.29□□□□□ -0.6
TCTN3-202ENST00000371209 PBX1P40424 430 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 KLK7P49862 253 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 SYCP1Q15431 976 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 SHHQ15465 462 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 PAN2Q504Q3 1202 aaKnown RBP11.29□□□□□ -0.6
TCTN3-202ENST00000371209 DPY19L2P1Q6NXN4 242 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 ABI1Q8IZP0 508 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 FBXL13Q8NEE6 735 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 BEST2Q8NFU1 509 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 RABGGTAQ92696 567 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 ZNF689Q96CS4 500 aaPredicted RBP11.29□□□□□ -0.6
TCTN3-202ENST00000371209 ERGIC2Q96RQ1 377 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
TCTN3-202ENST00000371209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■■ 46.6
TCTN3-202ENST00000371209 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 SIK3Q9Y2K2 1263 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 SLC4A7Q9Y6M7 1214 aa11.29□□□□□ -0.6
TCTN3-202ENST00000371209 TDRD15B5MCY1 1934 aaKnown RBP11.28□□□□□ -0.6
TCTN3-202ENST00000371209 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 GTPBP10A4D1E9 387 aaKnown RBP11.28□□□□□ -0.6
TCTN3-202ENST00000371209 CASTOR2A6NHX0 329 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 PIRO00625 290 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 CBFA2T2O43439 604 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 PHACTR2O75167 634 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 GJB5O95377 273 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 ADCY5O95622 1261 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 PON1P27169 355 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 PIK3CAP42336 1068 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 MYL6P60660 151 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 DSC1Q08554 894 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 TUSC3Q13454 348 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 NCOA4Q13772 614 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 EXOC3L4Q17RC7 722 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 FKBP15Q5T1M5 1219 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 GBP6Q6ZN66 633 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 HERC6Q8IVU3 1022 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 XYLT2Q9H1B5 865 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 SIX2Q9NPC8 291 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 RAB20Q9NX57 234 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 CEP290O15078 2479 aa11.28□□□□□ -0.6
TCTN3-202ENST00000371209 A0A1W2PQC6 194 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 F8W810 466 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 EPHB6O15197 1021 aa11.27□□□□□ -0.6
TCTN3-202ENST00000371209 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms