RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 POLR2BP30876 1174 aaKnown RBP16.03■□□□□ 0.16
COL9A1-204ENST00000370496 CASP4P49662 377 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 DSG1Q02413 1049 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 PAK1Q13153 545 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 ADAM9Q13443 819 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 RTP2Q5QGT7 225 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-204ENST00000370496 EP400NLQ6ZTU2 488 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 TAS1R1Q7RTX1 841 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 USP37Q86T82 979 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 FAM186BQ8IYM0 893 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 MRPL43Q8N983 215 aaKnown RBP16.03■□□□□ 0.16
COL9A1-204ENST00000370496 NELFBQ8WX92 580 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 FAM84AQ96KN4 292 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 TTPALQ9BTX7 342 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 EMILIN2Q9BXX0 1053 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 INTS13Q9NVM9 706 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 REV3LO60673 3130 aa16.03■□□□□ 0.16
COL9A1-204ENST00000370496 BICDL2A1A5D9 508 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 CETN3O15182 167 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 CLSTN1O94985 981 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 EFEMP2O95967 443 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
COL9A1-204ENST00000370496 KRT13P13646 458 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 IGFBP6P24592 240 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-204ENST00000370496 CCNE1P24864 410 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 TKTP29401 623 aaKnown RBP16.02■□□□□ 0.16
COL9A1-204ENST00000370496 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.16
COL9A1-204ENST00000370496 CREMQ03060 361 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 HYAL1Q12794 435 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 DUOXA2Q1HG44 320 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 CENPPQ6IPU0 288 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 MFSD14AQ96MC6 490 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 CDCA3Q99618 268 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-204ENST00000370496 IRAK3Q9Y616 596 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 COL6A3P12111 3177 aa16.02■□□□□ 0.16
COL9A1-204ENST00000370496 SCN1AP35498 2009 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PPP1R3GB7ZBB8 358 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PER2O15055 1255 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 AKAP3O75969 853 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 SRGAP2BP0DMP2 458 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PTMSP20962 102 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL9A1-204ENST00000370496 TAF6P49848 677 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PSMD5Q16401 504 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 DUSP6Q16828 381 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 SV2CQ496J9 727 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 CCDC183Q5T5S1 534 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 ANKRD40Q6AI12 368 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PDXDC1Q6P996 788 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PRSS55Q6UWB4 352 aaPredicted RBP16.01■□□□□ 0.15
COL9A1-204ENST00000370496 CD300LGQ6UXG3 332 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 DSTYKQ6XUX3 929 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 INTS8Q75QN2 995 aaKnown RBP16.01■□□□□ 0.15
COL9A1-204ENST00000370496 OR5B17Q8NGF7 314 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 SUSD3Q96L08 255 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL9A1-204ENST00000370496 CHST7Q9NS84 486 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 CLDND1Q9NY35 253 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
COL9A1-204ENST00000370496 ANO9A1A5B4 782 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 ARHGEF37A1IGU5 675 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 LRRIQ3A6PVS8 624 aaPredicted RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 PIRO00625 290 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 SYN3O14994 580 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 MAPK13O15264 365 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 SLC16A3O15427 465 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 NCK2O43639 380 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 ADH1AP07327 375 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 ODC1P11926 461 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 FGFR3P22607 806 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 PNPLA4P41247 253 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 NDUFV1P49821 464 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 STX17P56962 302 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 LILRA4P59901 499 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 FKBP3Q00688 224 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 BFSP1Q12934 665 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 BIRC3Q13489 604 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 KIAA0319Q5VV43 1072 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 LLGL2Q6P1M3 1020 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 PIK3R5Q8WYR1 880 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 PABPC5Q96DU9 382 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 POP1Q99575 1024 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 DACH1Q9UI36 760 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 CLASP2O75122 1294 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 PHACTR2O75167 634 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 CNPP09543 421 aaKnown RBP16■□□□□ 0.15
COL9A1-204ENST00000370496 PAX3P23760 479 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 KLRC2P26717 231 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 AARSP49588 968 aaKnown RBP eCLIP16■□□□□ 0.15
COL9A1-204ENST00000370496 VAMP7P51809 220 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 AP3M2P53677 418 aa16■□□□□ 0.15
COL9A1-204ENST00000370496 RBP5P82980 135 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms