RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 ALKAL1Q6UXT8 129 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 SLAIN1Q8ND83 568 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 ANKRD36BP1Q96IX9 119 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 UNC93B1Q9H1C4 597 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 CD58P19256 250 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 ANXA13P27216 316 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 POLR2BP30876 1174 aaKnown RBP15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 THPOP40225 353 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 ZNF132P52740 706 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 TMEM132DQ14C87 1099 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 TSGA10Q9BZW7 698 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 TRPV6Q9H1D0 765 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 ASB7Q9H672 318 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 MYO1AQ9UBC5 1043 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 CNTN6Q9UQ52 1028 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 MRFAP1Q9Y605 127 aa15.13■□□□□ 0.01
HMGCS2-201ENST00000369406 A0A1W2PQ45 241 aaPredicted RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 A0A1W2PQY0 241 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 SRGAP2O75044 1071 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 ABCB4P21439 1286 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 CDH8P55286 799 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 PTPROQ16827 1216 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 RNF180Q86T96 592 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 PCSK9Q8NBP7 692 aaKnown RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 KIF12Q96FN5 646 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 NAPGQ99747 312 aaPredicted RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 SMYD3Q9H7B4 428 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 ST3GAL5Q9UNP4 418 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 IPPQ9Y573 584 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 PCDHB4Q9Y5E5 795 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 V9GYY5 206 aaPredicted RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 GRID2IPA4D2P6 1211 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 CDR2Q01850 454 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 ORC1Q13415 861 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 TRPC3Q13507 836 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 MTFR1Q15390 333 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 SGSM1Q2NKQ1 1148 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 ENOSF1Q7L5Y1 443 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 RBBP8NLQ8NC74 664 aaPredicted RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 VTI1AQ96AJ9 217 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 OSGEPQ9NPF4 335 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 COG5Q9UP83 839 aa15.12■□□□□ 0.01
HMGCS2-201ENST00000369406 TET1Q8NFU7 2136 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 CTAGE9A4FU28 777 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 MGEA5O60502 916 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 IGFBP6P24592 240 aaPredicted RBP15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 ZBTB6Q15916 424 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 CCDC94Q9BW85 323 aaPredicted RBP15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 CISHQ9NSE2 258 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 DPP3Q9NY33 737 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 PALMO75781 387 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 H2AFZP0C0S5 128 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 PDE6CP51160 858 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 SOX4Q06945 474 aaPredicted RBP15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 SCN5AQ14524 2016 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 ZNF394Q53GI3 561 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 LLGL2Q6P1M3 1020 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 H2AFVQ71UI9 128 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 VPS36Q86VN1 386 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 TWNKQ96RR1 684 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 AGAP1Q9UPQ3 857 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 C2CD2Q9Y426 696 aa15.11■□□□□ 0.01
HMGCS2-201ENST00000369406 TDRD15B5MCY1 1934 aaKnown RBP15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 NCANO14594 1321 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 FTLP02792 175 aaPredicted RBP15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 CCDC172P0C7W6 258 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 GHRP10912 638 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 AXLP30530 894 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 CD52P31358 61 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 NFX1Q12986 1120 aaKnown RBP15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 PCBP1Q15365 356 aaKnown RBP eCLIP15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 WDR72Q3MJ13 1102 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 C2CD6Q53TS8 623 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 RPAINQ86UA6 219 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 CARD6Q9BX69 1037 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 TRIM6Q9C030 488 aaPredicted RBP15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 ISCUQ9H1K1 167 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 GOLGA2P5Q9HBQ8 144 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 CACNG4Q9UBN1 327 aa15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 PACSIN2Q9UNF0 486 aaPredicted RBP15.1■□□□□ 0.01
HMGCS2-201ENST00000369406 ZNF185O15231 689 aa15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 RPS6KA5O75582 802 aa15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 FTCDO95954 541 aa15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 TBXAS1P24557 533 aaPredicted RBP15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 POU5F1Q01860 360 aaKnown RBP15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 LPIN1Q14693 890 aa15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 MBTPS1Q14703 1052 aa15.09■□□□□ 0.01
HMGCS2-201ENST00000369406 FBXO47Q5MNV8 452 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms