RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 CFAP221Q4G0U5 840 aa16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 RIBC1Q8N443 379 aaPredicted RBP16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 ARHGEF2Q92974 986 aaKnown RBP16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 PRMT1Q99873 361 aaKnown RBP16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 CNOT10Q9H9A5 744 aaKnown RBP16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 CIDEBQ9UHD4 219 aa16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
SEMA6C-202ENST00000368912 A6NJR5 290 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 PPP1R3GB7ZBB8 358 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 GGPS1O95749 300 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 VPS41P49754 854 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 SLC4A7Q9Y6M7 1214 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 TJP3O95049 919 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 TMEM63BQ5T3F8 832 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 HS2ST1Q7LGA3 356 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 PPATQ06203 517 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 ZNF844Q08AG5 666 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 OTOP1Q7RTM1 612 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 CDR2LQ86X02 465 aaPredicted RBP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 CCDC127Q96BQ5 260 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 NMRK1Q9NWW6 199 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 FAF1Q9UNN5 650 aaPredicted RBP16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 PPP2R3BQ9Y5P8 575 aa16.31■□□□□ 0.2
SEMA6C-202ENST00000368912 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 LRRIQ4A6NIV6 560 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 BTBD19C9JJ37 291 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 SLC16A4O15374 487 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 TPBGLP0DKB5 382 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 GJA5P36382 358 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 KRT31Q15323 416 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 DUS1LQ6P1R4 473 aaKnown RBP16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 ETNPPLQ8TBG4 499 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 P2RX5Q93086 422 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 TMEM143Q96AN5 459 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 PDGFCQ9NRA1 345 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 SLITRK3O94933 977 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 ASLP04424 464 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 CCNG1P51959 295 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 EMC10Q5UCC4 262 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 LRRC8BQ6P9F7 803 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 PEX5LQ8IYB4 626 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 PPP1R14BQ96C90 147 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 KLK7P49862 253 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 LSAMPQ13449 338 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 CYLC2Q14093 348 aaPredicted RBP16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 INAQ16352 499 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 PRPF31Q8WWY3 499 aaKnown RBP16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 CLIC5Q9NZA1 410 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 FBXL5Q9UKA1 691 aa16.3■□□□□ 0.2
SEMA6C-202ENST00000368912 LRRC37AA6NMS7 1700 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 TISP43B9A030 160 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 CASP5P51878 434 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 UGCGQ16739 394 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 SLC2A7Q6PXP3 512 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 RUBCNQ92622 972 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 LENG9Q96B70 501 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 NACC1Q96RE7 527 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 INIPQ9NRY2 104 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 KBTBD4Q9NVX7 518 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 WRAP73Q9P2S5 460 aaPredicted RBP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 STIP1P31948 543 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 VHLP40337 213 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 ZNF449Q6P9G9 518 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 DDX42Q86XP3 938 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 TTC8Q8TAM2 541 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 CCDC42Q96M95 316 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 KCNMB3Q9NPA1 279 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 USP15Q9Y4E8 981 aaPredicted RBP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 ENTPD5O75356 428 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 NR2F2P24468 414 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 HPCAP84074 193 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 ERMARDQ5T6L9 678 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 TRAPPC12Q8WVT3 735 aa16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 SCG3Q8WXD2 468 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 JPH1Q9HDC5 661 aaPredicted RBP16.29■□□□□ 0.2
SEMA6C-202ENST00000368912 ASAP2O43150 1006 aa16.28■□□□□ 0.2
SEMA6C-202ENST00000368912 GSTT2P0CG29 244 aa16.28■□□□□ 0.2
SEMA6C-202ENST00000368912 GSTT2BP0CG30 244 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms