RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TADA2BQ86TJ2 420 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 ATP6V1G3Q96LB4 118 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 CNOT7Q9UIV1 285 aaKnown RBP19.06■□□□□ 0.64
SNX27-202ENST00000368841 BRD2P25440 801 aaKnown RBP19.06■□□□□ 0.64
SNX27-202ENST00000368841 HSPA9P38646 679 aaKnown RBP19.06■□□□□ 0.64
SNX27-202ENST00000368841 PLEKHM3Q6ZWE6 761 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 HASPINQ8TF76 798 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 ASCC2Q9H1I8 757 aaPredicted RBP19.06■□□□□ 0.64
SNX27-202ENST00000368841 PCDHB7Q9Y5E2 793 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 HIST1H2AGP0C0S8 130 aaPredicted RBP19.06■□□□□ 0.64
SNX27-202ENST00000368841 HIST1H2ADP20671 130 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 DEUP1Q05D60 604 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 HIST1H2AHQ96KK5 128 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 HIST1H2AJQ99878 128 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 H2AFJQ9BTM1 129 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 KDM1AO60341 852 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 WDR47O94967 919 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 NCOA4Q13772 614 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 C18orf8Q96DM3 657 aa19.06■□□□□ 0.64
SNX27-202ENST00000368841 CPA2P48052 419 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 CHSY1Q86X52 802 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 WDR24Q96S15 920 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 ALDH6A1Q02252 535 aaKnown RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 MRPL28Q13084 256 aaKnown RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 ANO5Q75V66 913 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 KIAA2013Q8IYS2 634 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 FAM84BQ96KN1 310 aaPredicted RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 C9orf72Q96LT7 481 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 ZNF197O14709 1029 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 CYP19A1P11511 503 aaPredicted RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 PTRHD1Q6GMV3 140 aaKnown RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 TNIP3Q96KP6 325 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 RPS6KA5O75582 802 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 WASHC5Q12768 1159 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 CNGA3Q16281 694 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 ANGEL2Q5VTE6 544 aaKnown RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 ABI2Q9NYB9 513 aaPredicted RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.05■□□□□ 0.646e-7■■■□□ 16.5
SNX27-202ENST00000368841 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 C3orf70A6NLC5 250 aaPredicted RBP19.05■□□□□ 0.64
SNX27-202ENST00000368841 SKOR1P84550 965 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 FAXCQ5TGI0 409 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 SH3TC2Q8TF17 1288 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 KDM6BO15054 1643 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 STK36Q9NRP7 1315 aa19.05■□□□□ 0.64
SNX27-202ENST00000368841 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 KRT4P19013 534 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 FOXO4P98177 505 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 IFNLR1Q8IU57 520 aaPredicted RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 C10orf53Q8N6V4 93 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 OTUB1Q96FW1 271 aaPredicted RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 VPS50Q96JG6 964 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 ZFP42Q96MM3 310 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 PHF20L1A8MW92 1017 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 GYS1P13807 737 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 C10orf120Q5SQS8 335 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 EFCAB12Q6NXP0 572 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 RIN3Q8TB24 985 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 AGPAT5Q9NUQ2 364 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 NFKBIL1Q9UBC1 381 aaPredicted RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 PLOD1Q02809 727 aaPredicted RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 PHF21AQ96BD5 680 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 FOPNLQ96NB1 174 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 CELF4Q9BZC1 486 aaKnown RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 LSM7Q9UK45 103 aaKnown RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 ZFXP17010 805 aaPredicted RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 PCYT1AP49585 367 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 RARS2Q5T160 578 aaKnown RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 HORMAD1Q86X24 394 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 TSSK1BQ9BXA7 367 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 FMR1Q06787 632 aaKnown RBP eCLIP19.04■□□□□ 0.64
SNX27-202ENST00000368841 KIF2BQ8N4N8 673 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 EFCAB14O75071 495 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 ITGA4P13612 1032 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 ALFQ53S48 1182 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 CCDC81Q6ZN84 652 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 PLD3Q8IV08 490 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 RFFLQ8WZ73 363 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 SENP7Q9BQF6 1050 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 BRD8Q9H0E9 1235 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 ZC3H7BQ9UGR2 993 aaKnown RBP19.04■□□□□ 0.64
SNX27-202ENST00000368841 GTF2A1LQ9UNN4 478 aa19.04■□□□□ 0.64
SNX27-202ENST00000368841 ASB14A6NK59 587 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 MYL2P10916 166 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 NEK2P51955 445 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 ZNF579Q8NAF0 562 aaKnown RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 RBBP8NLQ8NC74 664 aaPredicted RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 SGF29Q96ES7 293 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 HDAC4P56524 1084 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 NFIXQ14938 502 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 C2CD6Q53TS8 623 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 CHMP1BQ7LBR1 199 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 SLC44A2Q8IWA5 706 aaPredicted RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 DDX50Q9BQ39 737 aaKnown RBP19.03■□□□□ 0.64
SNX27-202ENST00000368841 ADGRG1Q9Y653 693 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 GRID2IPA4D2P6 1211 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 EMC2Q15006 297 aa19.03■□□□□ 0.64
SNX27-202ENST00000368841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms