RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 EPM2AIP1Q7L775 607 aaPredicted RBP10.71□□□□□ -0.69
CD48-202ENST00000368046 C3orf58Q8NDZ4 430 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 PIK3R5Q8WYR1 880 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 SUSD6Q92537 303 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 HPS3Q969F9 1004 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 FBXL18Q96ME1 805 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 NECAB3Q96P71 396 aaPredicted RBP10.71□□□□□ -0.69
CD48-202ENST00000368046 CLSTN3Q9BQT9 956 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 FGFBP2Q9BYJ0 223 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 PLEKHA4Q9H4M7 779 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 DZANK1Q9NVP4 752 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 DERAQ9Y315 318 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 NUB1Q9Y5A7 615 aa10.71□□□□□ -0.69
CD48-202ENST00000368046 C2orf72A6NCS6 295 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 GOLGA6L4A6NEF3 574 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 TK2O00142 265 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 KIAA0391O15091 583 aaKnown RBP10.7□□□□□ -0.7
CD48-202ENST00000368046 EIF3DO15371 548 aaKnown RBP eCLIP10.7□□□□□ -0.7
CD48-202ENST00000368046 PAX3P23760 479 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 LRPAP1P30533 357 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 SNRPFP62306 86 aaKnown RBP10.7□□□□□ -0.7
CD48-202ENST00000368046 ATAT1Q5SQI0 421 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 ELMSAN1Q6PJG2 1045 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 PRSS55Q6UWB4 352 aaPredicted RBP10.7□□□□□ -0.7
CD48-202ENST00000368046 PALB2Q86YC2 1186 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 ADHFE1Q8IWW8 467 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 GJD3Q8N144 294 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 BEST2Q8NFU1 509 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 USP15Q9Y4E8 981 aaPredicted RBP10.7□□□□□ -0.7
CD48-202ENST00000368046 MYO7AQ13402 2215 aa10.7□□□□□ -0.7
CD48-202ENST00000368046 SYN3O14994 580 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 TGFB1I1O43294 461 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 TGM5O43548 720 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 KLRC4O43908 158 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 EXTL3O43909 919 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 ZNF202O95125 648 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 IL18RAPO95256 599 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 GLUD1P00367 558 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 HOXD13P35453 343 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 PSMD5Q16401 504 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 JADE1Q6IE81 842 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 KANK3Q6NY19 840 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 CYP26C1Q6V0L0 522 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 KRBA2Q6ZNG9 492 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 ANKS3Q6ZW76 656 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 NT5DC4Q86YG4 428 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 GRAMD1CQ8IYS0 662 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 C12orf76Q8N812 135 aaPredicted RBP10.69□□□□□ -0.7
CD48-202ENST00000368046 FSIP1Q8NA03 581 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 SCFD1Q8WVM8 642 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 SUSD3Q96L08 255 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 RIPOR3Q96MK2 946 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 NECTIN4Q96NY8 510 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 POP1Q99575 1024 aaKnown RBP10.69□□□□□ -0.7
CD48-202ENST00000368046 FAM213AQ9BRX8 229 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 APOL5Q9BWW9 433 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 PHF7Q9BWX1 381 aaPredicted RBP10.69□□□□□ -0.7
CD48-202ENST00000368046 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 KIAA1586Q9HCI6 787 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 CD320Q9NPF0 282 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 TUBGCP4Q9UGJ1 667 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 C2CD2Q9Y426 696 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 BACE2Q9Y5Z0 518 aa10.69□□□□□ -0.7
CD48-202ENST00000368046 ZNF233A6NK53 670 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 H7C4K7 107 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 I3L4J1 428 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 PIRO00625 290 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 SPATA31D3P0C874 917 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 RPL17P18621 184 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 TKTP29401 623 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 SSTR3P32745 418 aaPredicted RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 OR1D2P34982 312 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 MTHFRP42898 656 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 ZP2Q05996 745 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 STK4Q13043 487 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 RAB33AQ14088 237 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 MRPL58Q14197 206 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 CBX2Q14781 532 aaPredicted RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 TMEM132DQ14C87 1099 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 KNOP1Q1ED39 458 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 RARS2Q5T160 578 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 ARMCX5Q6P1M9 558 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 TMC5Q6UXY8 1006 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 C15orf39Q6ZRI6 1047 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 SPATA31D4Q6ZUB0 917 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 GPR149Q86SP6 731 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 GLYCTKQ8IVS8 523 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 GPD1LQ8N335 351 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 KREMEN2Q8NCW0 462 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 ZSWIM2Q8NEG5 633 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 APPL2Q8NEU8 664 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 CMASQ8NFW8 434 aaPredicted RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
CD48-202ENST00000368046 SAAL1Q96ER3 474 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 CCDC34Q96HJ3 373 aa10.68□□□□□ -0.7
CD48-202ENST00000368046 CBWD1Q9BRT8 395 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms