RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CD44P16070 742 aaKnown RBP16.21■□□□□ 0.19
VAMP4-202ENST00000367740 PPP2R5CQ13362 524 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 TFDP1Q14186 410 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 ELF2Q15723 593 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 C3orf58Q8NDZ4 430 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 E2F7Q96AV8 911 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 ZFYVE19Q96K21 471 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 LXNQ9BS40 222 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 CACNA1EQ15878 2313 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 ZBTB39O15060 712 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 DCLK1O15075 740 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 KALRNO60229 2985 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 B3GAT3O94766 335 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 P4HBP07237 508 aaKnown RBP16.2■□□□□ 0.18
VAMP4-202ENST00000367740 BRCC3P46736 316 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 RCAN1P53805 252 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 FGD1P98174 961 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 EXOSC10Q01780 885 aaKnown RBP16.2■□□□□ 0.18
VAMP4-202ENST00000367740 NECTIN1Q15223 517 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 COL28A1Q2UY09 1125 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 XKR9Q5GH70 373 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 C4orf19Q8IY42 314 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 LRRC3BQ96PB8 259 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 ASAH2Q9NR71 780 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 POLR3BQ9NW08 1133 aaPredicted RBP16.2■□□□□ 0.18
VAMP4-202ENST00000367740 SLC8A2Q9UPR5 921 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 THADAQ6YHU6 1953 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 TENM4Q6N022 2769 aa16.2■□□□□ 0.18
VAMP4-202ENST00000367740 PCNX2A6NKB5 2137 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 TBX3O15119 743 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
VAMP4-202ENST00000367740 RHOBTB1O94844 696 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 CLCNKBP51801 687 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 ARPP19P56211 112 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 IQCEQ6IPM2 695 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 ELMOD1Q8N336 334 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 LEMD2Q8NC56 503 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 HHIPQ96QV1 700 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 ABCA7Q8IZY2 2146 aa16.19■□□□□ 0.18
VAMP4-202ENST00000367740 TNRC6BQ9UPQ9 1833 aaKnown RBP16.19■□□□□ 0.18
VAMP4-202ENST00000367740 TTLL13PA6NNM8 815 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 PATE3B3GLJ2 98 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 SLC37A4O43826 429 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 GLRA2P23416 452 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 TNK2Q07912 1038 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 TWF1Q12792 350 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 STXBP5Q5T5C0 1151 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 GPIHBP1Q8IV16 184 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 CAMKK1Q8N5S9 505 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 ZNF512Q96ME7 567 aaPredicted RBP16.18■□□□□ 0.18
VAMP4-202ENST00000367740 GPR88Q9GZN0 384 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 GOLGA2P5Q9HBQ8 144 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 ANKFY1Q9P2R3 1169 aa16.18■□□□□ 0.18
VAMP4-202ENST00000367740 KHNYNO15037 678 aaKnown RBP16.17■□□□□ 0.18
VAMP4-202ENST00000367740 ARL2P36404 184 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
VAMP4-202ENST00000367740 UPP1Q16831 310 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 UAP1L1Q3KQV9 507 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 ARHGAP29Q52LW3 1261 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 GLRA4Q5JXX5 417 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 MOXD1Q6UVY6 613 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 OTUD6AQ7L8S5 288 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 ADAM32Q8TC27 787 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 DCBLD2Q96PD2 775 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
VAMP4-202ENST00000367740 TMEM209Q96SK2 561 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 RGL1Q9NZL6 768 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
VAMP4-202ENST00000367740 NAV2Q8IVL1 2488 aa16.17■□□□□ 0.18
VAMP4-202ENST00000367740 NID2Q14112 1375 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 SPAARA0A1B0GVQ0 90 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 A0A1W2PRU2 124 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 FAM221BA6H8Z2 402 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 TRAPPC3O43617 180 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 ATG13O75143 517 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 TMEM196Q5HYL7 178 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 TPGS2Q68CL5 300 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 FSTL4Q6MZW2 842 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 TMC8Q8IU68 726 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 ARID3BQ8IVW6 561 aaPredicted RBP16.16■□□□□ 0.18
VAMP4-202ENST00000367740 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 MKNK1Q9BUB5 465 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 LRRC3Q9BY71 257 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
VAMP4-202ENST00000367740 KCNMB3Q9NPA1 279 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 FBXL5Q9UKA1 691 aa16.16■□□□□ 0.18
VAMP4-202ENST00000367740 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
VAMP4-202ENST00000367740 CCDC196A0A1B0GTZ2 297 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 AAMPQ13685 434 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 CTTNQ14247 550 aaKnown RBP16.15■□□□□ 0.18
VAMP4-202ENST00000367740 PMS2CLQ68D20 193 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms