RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 KBTBD4Q9NVX7 518 aa12.23□□□□□ -0.45
SYNE1-204ENST00000367248 GPR182O15218 404 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 KLRC1P26715 233 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 NPTX2P47972 431 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 KLHDC7AQ5VTJ3 777 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 STKLD1Q8NE28 680 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 SLC30A5Q8TAD4 765 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 UBA3Q8TBC4 463 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 BAG5Q9UL15 447 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 FAN1Q9Y2M0 1017 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 TOM1L1O75674 476 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 PTPRAP18433 802 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 NAMPTP43490 491 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 SP3Q02447 781 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 COLEC11Q9BWP8 271 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 MAGEB5Q9BZ81 275 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CASTOR2A6NHX0 329 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 USP27XA6NNY8 438 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 DDHD2O94830 711 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ENDOD1O94919 500 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 URODP06132 367 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 TGFB3P10600 412 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ROR1Q01973 937 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 TTC23LQ6PF05 361 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CPA5Q8WXQ8 436 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 RNPC3Q96LT9 517 aaKnown RBP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 MED15Q96RN5 788 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 TXNDC9O14530 226 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ETFBP38117 255 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 PGM5Q15124 567 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 RNF135Q8IUD6 432 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CLCA2Q9UQC9 943 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 NOL3O60936 208 aaKnown RBP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 SYF2O95926 243 aaKnown RBP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 KRT14P02533 472 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CKMP06732 381 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 MYL4P12829 197 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CBWD2Q8IUF1 395 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 SCG3Q8WXD2 468 aaKnown RBP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 EXOC4Q96A65 974 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 HPSEQ9Y251 543 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ESYT3A0FGR9 886 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CFAP69A5D8W1 941 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 PGK1P00558 417 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 PCK1P35558 622 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CCT5P48643 541 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ADCK2Q7Z695 626 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ZC3H18Q86VM9 953 aaKnown RBP12.22□□□□□ -0.45
SYNE1-204ENST00000367248 CCDC197Q8NCU1 140 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 AGAP3Q96P47 875 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 ERGIC2Q96RQ1 377 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 GPRC5DQ9NZD1 345 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 PCDHB12Q9Y5F1 795 aa12.22□□□□□ -0.45
SYNE1-204ENST00000367248 GRIK5Q16478 980 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 TSNAXIP1Q2TAA8 658 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 CD302Q8IX05 232 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 EFHBQ8N7U6 833 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 H3BRB1 525 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 DRP2Q13474 957 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 SLC30A10Q6XR72 485 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 PID1Q7Z2X4 250 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 TRPM4Q8TD43 1214 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 HPDLQ96IR7 371 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 PI4K2AQ9BTU6 479 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 NUF2Q9BZD4 464 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 TUT1Q9H6E5 874 aaKnown RBP12.21□□□□□ -0.45
SYNE1-204ENST00000367248 EHD2Q9NZN4 543 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 PCDHAC2Q9Y5I4 1007 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 GIT2Q14161 759 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 RGMBQ6NW40 437 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 MIB1Q86YT6 1006 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 C1orf54Q8WWF1 131 aa12.21□□□□□ -0.45
SYNE1-204ENST00000367248 RSRC1Q96IZ7 334 aaKnown RBP12.21□□□□□ -0.45
SYNE1-204ENST00000367248 RPLP2P05387 115 aaKnown RBP12.21□□□□□ -0.46
SYNE1-204ENST00000367248 TPI1P60174 286 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 EGFL8Q99944 293 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.46
SYNE1-204ENST00000367248 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.21□□□□□ -0.46
SYNE1-204ENST00000367248 GOLGA8QA0A0J9YX86 632 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 GOLGA8OA6NCC3 632 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 GOLGA8NF8WBI6 632 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 HADHAP40939 763 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 ACBD5Q5T8D3 534 aaPredicted RBP12.21□□□□□ -0.46
SYNE1-204ENST00000367248 KLC3Q6P597 504 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 CCDC137Q6PK04 289 aaKnown RBP12.21□□□□□ -0.46
SYNE1-204ENST00000367248 ATP8B4Q8TF62 1192 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 RNF19AQ9NV58 838 aa12.21□□□□□ -0.46
SYNE1-204ENST00000367248 MROH2AA6NES4 1674 aa12.2□□□□□ -0.46
SYNE1-204ENST00000367248 KLRC2P26717 231 aa12.2□□□□□ -0.46
SYNE1-204ENST00000367248 TWF1Q12792 350 aa12.2□□□□□ -0.46
SYNE1-204ENST00000367248 NAB2Q15742 525 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms