RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 GNA15P30679 374 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 HOXA11P31270 313 aaPredicted RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 GRM5P41594 1212 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 GPC5P78333 572 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 SNX17Q15036 470 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 CLEC16AQ2KHT3 1053 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 CCDC181Q5TID7 509 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 RABGGTAQ92696 567 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 TAF4BQ92750 862 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 EPC1Q9H2F5 836 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 RNF186Q9NXI6 227 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 CTTNBP2NLQ9P2B4 639 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 PCNTO95613 3336 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 ITGB3P05106 788 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 PCBP1Q15365 356 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK2-201ENST00000366998 RPS6KA1Q15418 735 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 FAM47CQ5HY64 1035 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 TMEM130Q8N3G9 435 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 GPR161Q8N6U8 529 aaKnown RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 CD99L2Q8TCZ2 262 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 NXF1Q9UBU9 619 aaKnown RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 SIX4Q9UIU6 781 aa16.03■□□□□ 0.16
NEK2-201ENST00000366998 PIN4Q9Y237 131 aaKnown RBP16.03■□□□□ 0.16
NEK2-201ENST00000366998 PDE2AO00408 941 aaPredicted RBP16.02■□□□□ 0.16
NEK2-201ENST00000366998 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.16
NEK2-201ENST00000366998 THAP12O43422 761 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 HOXC8P31273 242 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 ACAD10Q6JQN1 1059 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 CREG2Q8IUH2 290 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 PDCL2Q8N4E4 241 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 TMEM40Q8WWA1 233 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 EIF2AQ9BY44 585 aaKnown RBP16.02■□□□□ 0.16
NEK2-201ENST00000366998 XYLT2Q9H1B5 865 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 SNTG2Q9NY99 539 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 POLIQ9UNA4 740 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 CNTN6Q9UQ52 1028 aa16.02■□□□□ 0.16
NEK2-201ENST00000366998 BUB1BO60566 1050 aaPredicted RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 KIF4AO95239 1232 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 WEE2P0C1S8 567 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 AXLP30530 894 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 PAFAH1B1P43034 410 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 TUBB4BP68371 445 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 ZNF667Q5HYK9 610 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 TAF2Q6P1X5 1199 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 NME8Q8N427 588 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 UBR7Q8N806 425 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 NOA1Q8NC60 698 aaKnown RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 RPGRIP1Q96KN7 1286 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 CISHQ9NSE2 258 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 APLP1P51693 650 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 GUCY2FP51841 1108 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 YARSP54577 528 aaKnown RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
NEK2-201ENST00000366998 FBXO38Q6PIJ6 1188 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 SLFN11Q7Z7L1 901 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 PASD1Q8IV76 773 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 CD302Q8IX05 232 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 APOL6Q9BWW8 343 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 SMARCAL1Q9NZC9 954 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 EHD2Q9NZN4 543 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 SRRDQ9UH36 339 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 GTF2IRD1Q9UHL9 959 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 AMFRQ9UKV5 643 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 COG5Q9UP83 839 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 C2CD2Q9Y426 696 aa16.01■□□□□ 0.15
NEK2-201ENST00000366998 M0QZ92 97 aa16■□□□□ 0.15
NEK2-201ENST00000366998 KCNK3O14649 394 aa16■□□□□ 0.15
NEK2-201ENST00000366998 ADAMTS4O75173 837 aa16■□□□□ 0.15
NEK2-201ENST00000366998 RHOXF2BP0C7M4 288 aa16■□□□□ 0.15
NEK2-201ENST00000366998 HOXD10P28358 340 aa16■□□□□ 0.15
NEK2-201ENST00000366998 ASPAP45381 313 aa16■□□□□ 0.15
NEK2-201ENST00000366998 RAP1GAPP47736 663 aa16■□□□□ 0.15
NEK2-201ENST00000366998 ZNF132P52740 706 aa16■□□□□ 0.15
NEK2-201ENST00000366998 C2orf54Q08AI8 447 aa16■□□□□ 0.15
NEK2-201ENST00000366998 WDR72Q3MJ13 1102 aa16■□□□□ 0.15
NEK2-201ENST00000366998 ZNF394Q53GI3 561 aa16■□□□□ 0.15
NEK2-201ENST00000366998 NAA35Q5VZE5 725 aa16■□□□□ 0.15
NEK2-201ENST00000366998 CPA5Q8WXQ8 436 aa16■□□□□ 0.15
NEK2-201ENST00000366998 RHOXF2Q9BQY4 288 aa16■□□□□ 0.15
NEK2-201ENST00000366998 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
NEK2-201ENST00000366998 DPP3Q9NY33 737 aa16■□□□□ 0.15
NEK2-201ENST00000366998 CHORDC1Q9UHD1 332 aaPredicted RBP16■□□□□ 0.15
NEK2-201ENST00000366998 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
NEK2-201ENST00000366998 AGAP1Q9UPQ3 857 aa16■□□□□ 0.15
NEK2-201ENST00000366998 HES2Q9Y543 173 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms