RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PPHLN1Q8NEY8 458 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 OLFML3Q9NRN5 406 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 AARSP49588 968 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■□□□□ 8.7
CDC42BPA-203ENST00000366766 KIF9Q9HAQ2 790 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 RAVER2Q9HCJ3 691 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 HACD3Q9P035 362 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 TTC7AQ9ULT0 858 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 CYP26A1O43174 497 aa12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 TOMM70O94826 608 aa12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 PCSK1P29120 753 aa12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 RAD51Q06609 339 aa12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 PCYOX1LQ8NBM8 494 aa12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF473Q8WTR7 871 aaKnown RBP12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 SCFD2Q8WU76 684 aa12.65□□□□□ -0.39
CDC42BPA-203ENST00000366766 ELMOD1Q8N336 334 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 MXRA8Q9BRK3 442 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAM49AQ9H0Q0 323 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 MCL1Q07820 350 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 KLC1Q07866 573 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 RNF219Q5W0B1 726 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 OR9Q1Q8NGQ5 310 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 VPS11Q9H270 941 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CCT8L1PA6NM43 557 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CREB3O43889 395 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 MYO1DO94832 1006 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRKCBP05771 671 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 GMCL1Q96IK5 515 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SP110Q9HB58 689 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CHD4Q14839 1912 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 ATP5BP06576 529 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 WDR72Q3MJ13 1102 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 IER5Q5VY09 327 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 MRPL1Q9BYD6 325 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 DHX35Q9H5Z1 703 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 TRPA1O75762 1119 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 PGM1P36871 562 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 FAR2Q96K12 515 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 NT5C1AQ9BXI3 368 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 RALAP11233 206 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPRP35270 261 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 IRAK1P51617 712 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 TRIM65Q6PJ69 517 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 C2orf69Q8N8R5 385 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SLIT3O75094 1523 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SNRPAP09012 282 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 SREBF1P36956 1147 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 MRPL46Q9H2W6 279 aaKnown RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 PLEKHA5Q9HAU0 1116 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 GTSE1Q9NYZ3 720 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 RSPH10B2B2RC85 870 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 E5RI56 91 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 RSPH10BP0C881 870 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CHN1P15882 459 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CNTFP26441 200 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 TTC39BQ5VTQ0 682 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 DPF2Q92785 391 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 DCTN4Q9UJW0 460 aa12.64□□□□□ -0.39
CDC42BPA-203ENST00000366766 CHD2O14647 1828 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 GARTP22102 1010 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 TPI1P60174 286 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPP2Q13103 211 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 FUCA2Q9BTY2 467 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 POLBP06746 335 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 CORO7P57737 925 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 EMC2Q15006 297 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 AGBL3Q8NEM8 1001 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SYCE1LA8MT33 242 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 HSPA1AP0DMV8 641 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 HSPA1BP0DMV9 641 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 LLGL1Q15334 1064 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 MAPRE1Q15691 268 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 TBC1D10BQ4KMP7 808 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 C1orf54Q8WWF1 131 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 C21orf2O43822 256 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 FGFR4P22455 802 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 TTI2Q6NXR4 508 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 OTUB1Q96FW1 271 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 PRMT1Q99873 361 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 APRTP07741 180 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 HADHAP40939 763 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 GSPT2Q8IYD1 628 aaKnown RBP12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 SEC16BQ96JE7 1060 aa12.63□□□□□ -0.39
CDC42BPA-203ENST00000366766 ZSWIM1Q9BR11 485 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms