RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RASSF8Q8NHQ8 419 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 DDX12PQ92771 950 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 AVENQ9NQS1 362 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CCDC39Q9UFE4 941 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 UBQLN1Q9UMX0 589 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 NUB1Q9Y5A7 615 aa14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-202ENST00000366159 FRMD3A2A2Y4 597 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 TISP43B9A030 160 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 H7C4K7 107 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 XYLBO75191 536 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 OAZ2O95190 189 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 KRT18P05783 430 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 MATR3P43243 847 aaKnown RBP eCLIP14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CLCN5P51795 746 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PTPN5P54829 565 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 POU5F1Q01860 360 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SPATA1Q5VX52 437 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 RRAGBQ5VZM2 374 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ASTLQ6HA08 431 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 POTEHQ6S545 545 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 GET4Q7L5D6 327 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 DYMQ7RTS9 669 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CD302Q8IX05 232 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 KRI1Q8N9T8 703 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 LINC00301Q8NCQ3 95 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ITFG1Q8TB96 612 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 FGF13Q92913 245 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 IKZF4Q9H2S9 585 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 HCFC1R1Q9NWW0 138 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SEL1LQ9UBV2 794 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 WNT16Q9UBV4 365 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CDH7Q9ULB5 785 aa14.88□□□□□ -0.03
TNFRSF1A-202ENST00000366159 MYH15Q9Y2K3 1946 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SEC24AO95486 1093 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SRFP11831 508 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ADSSP30520 456 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 MCM4P33991 863 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 TPGS2Q68CL5 300 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CRELD2Q6UXH1 353 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SV2BQ7L1I2 683 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SFR1Q86XK3 245 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 APPL2Q8NEU8 664 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 BEST2Q8NFU1 509 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 FGF14Q92915 247 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 HVCN1Q96D96 273 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ZHX3Q9H4I2 956 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 RPF1Q9H9Y2 349 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 KCNH3Q9ULD8 1083 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 MAFFQ9ULX9 164 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 NUMBLQ9Y6R0 609 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ANK1P16157 1881 aa14.87□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ANO9A1A5B4 782 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 KRBA1A5PL33 1030 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PIRO00625 290 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PPEF2O14830 753 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 GUCY2FP51841 1108 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 KCNA1Q09470 495 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SLC5A9Q2M3M2 681 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CTXN3Q4LDR2 81 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 JADE1Q6IE81 842 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SLFN12LQ6IEE8 588 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PARM1Q6UWI2 310 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CCDC73Q6ZRK6 1079 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ALYREFQ86V81 257 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PHOX2BQ99453 314 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ASB7Q9H672 318 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SLC2A4RGQ9NR83 387 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 OLFML3Q9NRN5 406 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 DERAQ9Y315 318 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 CACNA1HO95180 2353 aa14.86□□□□□ -0.03
TNFRSF1A-202ENST00000366159 XPOTO43592 962 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PI15O43692 258 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PPP6R2O75170 966 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 VNN2O95498 520 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 NFICP08651 508 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 GAP43P17677 238 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 AOC1P19801 751 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 TXLNAP40222 546 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ACOT2P49753 483 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 LILRA4P59901 499 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 E2F4Q16254 413 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PABPC1LQ4VXU2 614 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PRSS36Q5K4E3 855 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ADALQ6DHV7 355 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 ZNF280DQ6N043 979 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 NPAS3Q8IXF0 933 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 OXCT2Q9BYC2 517 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 PANK2Q9BZ23 570 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 AFF4Q9UHB7 1163 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 AGO2Q9UKV8 859 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 POLIQ9UNA4 740 aa14.85□□□□□ -0.03
TNFRSF1A-202ENST00000366159 VPS13AQ96RL7 3174 aa14.84□□□□□ -0.03
TNFRSF1A-202ENST00000366159 SPTLC1O15269 473 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms