RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ADPGKQ9BRR6 497 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 ERVK-5Q9HDB9 667 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 KCNH7Q9NS40 1196 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 PCDHB2Q9Y5E7 798 aa14.68□□□□□ -0.06
COL6A1-201ENST00000361866 GRIN2DO15399 1336 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 CST8O60676 142 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 KRT38O76015 456 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 GSTA1P08263 222 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 FECHP22830 423 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 TNFRSF8P28908 595 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 THOC5Q13769 683 aaKnown RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 BTNL9Q6UXG8 535 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 PGM2Q96G03 612 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 POLR3FQ9H1D9 316 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 Q9H521 79 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 ANLNQ9NQW6 1124 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 SENP1Q9P0U3 644 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 ECE2O60344 883 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 SLC1A1P43005 524 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 SOX10P56693 466 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 EIF3EP60228 445 aaKnown RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 PPATQ06203 517 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 RASSF3Q86WH2 238 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 FAM111AQ96PZ2 611 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 RPS6KC1Q96S38 1066 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 POLR3CQ9BUI4 534 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 DDX4Q9NQI0 724 aaKnown RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 SPATA31A1Q5TZJ5 1347 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 GPC4O75487 556 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 ASNSP08243 561 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 ZNF699Q32M78 642 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 ARID3BQ8IVW6 561 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 PRELID2Q8N945 189 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 RBBP8NLQ8NC74 664 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-201ENST00000361866 FAM84AQ96KN4 292 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 SH3GL3Q99963 347 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 RAB6BQ9NRW1 208 aa14.67□□□□□ -0.06
COL6A1-201ENST00000361866 C21orf2O43822 256 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 GRAP2O75791 330 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 HLA-DRAP01903 254 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 CALB1P05937 261 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 SLC12A3P55017 1021 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 DLG4P78352 724 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 IFRD2Q12894 506 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-201ENST00000361866 GRM1Q13255 1194 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 TMED1Q13445 227 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 AUHQ13825 339 aaKnown RBP14.66□□□□□ -0.06
COL6A1-201ENST00000361866 VPS72Q15906 364 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 TAF1BQ53T94 588 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-201ENST00000361866 LRRC43Q8N309 656 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 TEKT4Q8WW24 435 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 MIEF2Q96C03 454 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 TMEM121Q9BTD3 319 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 DNAJC18Q9H819 358 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 ARHGAP23Q9P227 1491 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 CRCPO75575 148 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 GJB6O95452 261 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 WEE2P0C1S8 567 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 GHRP10912 638 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 EPHB2P29323 1055 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 ACAD10Q6JQN1 1059 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 MIS18BP1Q6P0N0 1132 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 KRT3P12035 628 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 RANBP1P43487 201 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 AP2B1P63010 937 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 IRX1P78414 480 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-201ENST00000361866 NFX1Q12986 1120 aaKnown RBP14.66□□□□□ -0.06
COL6A1-201ENST00000361866 FAM102AQ5T9C2 384 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-201ENST00000361866 CYP4A22Q5TCH4 519 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 SPOPLQ6IQ16 392 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 SULF1Q8IWU6 871 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 KLC2Q9H0B6 622 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 RXFP1Q9HBX9 757 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 MON2Q7Z3U7 1717 aa14.66□□□□□ -0.06
COL6A1-201ENST00000361866 DDTLA6NHG4 134 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-201ENST00000361866 UPP2O95045 317 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 RBP3P10745 1247 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 NPR1P16066 1061 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 RPS6KA2Q15349 733 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 ANKRD20A2Q5SQ80 823 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 ANKRD20A1Q5TYW2 823 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 TTC13Q8NBP0 860 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 SENP7Q9BQF6 1050 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 CENPKQ9BS16 269 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 JAK3P52333 1124 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 BCAR1P56945 870 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 KRT76Q01546 638 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 PTK7Q13308 1070 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 CNGA2Q16280 664 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 CDR2LQ86X02 465 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-201ENST00000361866 MTBPQ96DY7 904 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-201ENST00000361866 PCDHA10Q9Y5I2 948 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 HSPA4LO95757 839 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 CCND2P30279 289 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 SPP2Q13103 211 aa14.65□□□□□ -0.06
COL6A1-201ENST00000361866 SYDE1Q6ZW31 735 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms