RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 XRRA1Q6P2D8 792 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 METTL23Q86XA0 190 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 ACSF2Q96CM8 615 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 MMP19Q99542 508 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 TPX2Q9ULW0 747 aaKnown RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 DPEP1P16444 411 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 KCNMA1Q12791 1236 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 ZNF677Q86XU0 584 aa17.25■□□□□ 0.35
SCAF1-201ENST00000360565 EPS8L3Q8TE67 593 aaKnown RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 AENQ8WTP8 325 aaKnown RBP17.25■□□□□ 0.35
SCAF1-201ENST00000360565 FAM47DPA6NHR8 397 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 GRAP2O75791 330 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 APRTP07741 180 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 SEPT6Q14141 434 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 ARL13BQ3SXY8 428 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 TRPM8Q7Z2W7 1104 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 CERS5Q8N5B7 392 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 TSEN2Q8NCE0 465 aaKnown RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 GPRASP2Q96D09 838 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 RAB6BQ9NRW1 208 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 BRD2P25440 801 aaKnown RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 SOX10P56693 466 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 RWDD4Q6NW29 188 aaKnown RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 SYTL5Q8TDW5 730 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 RAPGEF5Q92565 580 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 HDAC11Q96DB2 347 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 KLF6Q99612 283 aaPredicted RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 AKAP12Q02952 1782 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 TMEM150BA6NC51 233 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 RBP3P10745 1247 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 THOC5Q13769 683 aaKnown RBP17.24■□□□□ 0.35
SCAF1-201ENST00000360565 NUDCD3Q8IVD9 361 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 SGSM3Q96HU1 749 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 PDCD2LQ9BRP1 358 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 IDI2Q9BXS1 227 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 NIF3L1Q9GZT8 377 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 WDR35Q9P2L0 1181 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 SNX9Q9Y5X1 595 aa17.24■□□□□ 0.35
SCAF1-201ENST00000360565 CUL2Q13617 745 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 C1orf131Q8NDD1 294 aaKnown RBP17.23■□□□□ 0.35
SCAF1-201ENST00000360565 BAP1Q92560 729 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 ELMO3Q96BJ8 720 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 CFLARO15519 480 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 SLIT3O75094 1523 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 CCT8L1PA6NM43 557 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 KCNN4O15554 427 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 HSPA4LO95757 839 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 MYBL2P10244 700 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 LRRC34Q8IZ02 419 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 KCNMB3Q9NPA1 279 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 GGA3Q9NZ52 723 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
SCAF1-201ENST00000360565 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 MEIS2O14770 477 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 CYP4A22Q5TCH4 519 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 ACAP3Q96P50 834 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 SEMA4AQ9H3S1 761 aa17.23■□□□□ 0.35
SCAF1-201ENST00000360565 RARGP13631 454 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 AMPD2Q01433 879 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 TTC39CQ8N584 583 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 IPO11Q9UI26 975 aaKnown RBP17.22■□□□□ 0.35
SCAF1-201ENST00000360565 APOBEC2Q9Y235 224 aaKnown RBP17.22■□□□□ 0.35
SCAF1-201ENST00000360565 SPECC1L-ADORA2AF8WAN1 911 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 OATP04181 439 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 PTENP60484 403 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 MYBPC2Q14324 1141 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 C3orf62Q6ZUJ4 267 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 NT5DC3Q86UY8 548 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 CHMP2BQ9UQN3 213 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 KRT10P13645 584 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 FOXR1Q6PIV2 292 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 C15orf52Q6ZUT6 534 aaKnown RBP17.22■□□□□ 0.35
SCAF1-201ENST00000360565 C4orf19Q8IY42 314 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 SPATA18Q8TC71 538 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 FOXP3Q9BZS1 431 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 STAP1Q9ULZ2 295 aa17.22■□□□□ 0.35
SCAF1-201ENST00000360565 MAP3K7O43318 606 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 SMIM24O75264 130 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 RFC5P40937 340 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 CENPCQ03188 943 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 TATDN2Q93075 761 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 RNF139Q8WU17 664 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 NUDCD1Q96RS6 583 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 Q9H521 79 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 FNDC3AQ9Y2H6 1198 aaKnown RBP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 TISP43B9A030 160 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms