RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRPC3Q13507 836 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 NCOA4Q13772 614 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 SLC10A6Q3KNW5 377 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 FAM26DQ5JW98 314 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 DNTTIP2Q5QJE6 756 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 JADE1Q6IE81 842 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 SLC39A5Q6ZMH5 540 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 ANKRD33Q7Z3H0 272 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 IRF2BP2Q7Z5L9 587 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 VPS36Q86VN1 386 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 GPIHBP1Q8IV16 184 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 REXO1L1PQ8IX06 675 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 HELQQ8TDG4 1101 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 FAM84AQ96KN4 292 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 PI4K2AQ9BTU6 479 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 C1QTNF1Q9BXJ1 281 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 EIF2AQ9BY44 585 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 TRPV6Q9H1D0 765 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 C2CD2Q9Y426 696 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 SQORQ9Y6N5 450 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 TDRD15B5MCY1 1934 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 BDP1A6H8Y1 2624 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 GPR182O15218 404 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 LCA5LO95447 670 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 TBXAS1P24557 533 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 TMEM132DQ14C87 1099 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 PTPN14Q15678 1187 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 TRIM71Q2Q1W2 868 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 UBXN11Q5T124 520 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 TWF2Q6IBS0 349 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 KIAA1328Q86T90 577 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 SHC3Q92529 594 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 DHX38Q92620 1227 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 C16orf45Q96MC5 204 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 KREMEN1Q96MU8 473 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 TOX2Q96NM4 488 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 GPR88Q9GZN0 384 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 HAUS4Q9H6D7 363 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 LUC7LQ9NQ29 371 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 CHST12Q9NRB3 414 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 SNTG2Q9NY99 539 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 ST3GAL5Q9UNP4 418 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 DERAQ9Y315 318 aa14.88□□□□□ -0.03
PDLIM5-203ENST00000359265 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 PQBP1O60828 265 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 RECQL4O94761 1208 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 ASS1P00966 412 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 CD4P01730 458 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 TUBB4AP04350 444 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 PNMA6AP0CW24 399 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 CKBP12277 381 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 ATN1P54259 1190 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 PAK2Q13177 524 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 SGSM1Q2NKQ1 1148 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 ASTE1Q2TB18 679 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 ARHGAP29Q52LW3 1261 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 FBXO47Q5MNV8 452 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 NYAP1Q6ZVC0 841 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 HACE1Q8IYU2 909 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 TAF4BQ92750 862 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 TATDN2Q93075 761 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 JAKMIP2Q96AA8 810 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 TSPAN18Q96SJ8 248 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 NXF3Q9H4D5 531 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 ERVK-5Q9HDB9 667 aa14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 REXO2Q9Y3B8 237 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-203ENST00000359265 PIEZO1Q92508 2521 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 RBAK-RBAKDNI3L0D1 243 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 FOXN3O00409 490 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 MEFVO15553 781 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 USP8P40818 1118 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 VAV2P52735 878 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 MYL6P60660 151 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 PTK2Q05397 1052 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 NFX1Q12986 1120 aaKnown RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 CUL2Q13617 745 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 SLC18A3Q16572 532 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 ZNF699Q32M78 642 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 ZNF618Q5T7W0 954 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 SMYD5Q6GMV2 418 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 FAM71AQ8IYT1 594 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 KAT5Q92993 513 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 KIF12Q96FN5 646 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 APOL6Q9BWW8 343 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 IFIH1Q9BYX4 1025 aaKnown RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 NIF3L1Q9GZT8 377 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 ITGA11Q9UKX5 1188 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 HCN4Q9Y3Q4 1203 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 R3HCC1Q9Y3T6 440 aaKnown RBP14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 IPPQ9Y573 584 aa14.86□□□□□ -0.03
PDLIM5-203ENST00000359265 XPOTO43592 962 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-203ENST00000359265 PARNO95453 639 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms