RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
NLRC3-202ENST00000359128 MAN1C1Q9NR34 630 aa13.65□□□□□ -0.22
NLRC3-202ENST00000359128 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
NLRC3-202ENST00000359128 MBL2P11226 248 aaPredicted RBP13.65□□□□□ -0.23
NLRC3-202ENST00000359128 TAF6P49848 677 aa13.65□□□□□ -0.23
NLRC3-202ENST00000359128 SNRNP35Q16560 246 aaKnown RBP13.65□□□□□ -0.23
NLRC3-202ENST00000359128 NUDCD3Q8IVD9 361 aa13.65□□□□□ -0.23
NLRC3-202ENST00000359128 SIRT2Q8IXJ6 389 aa13.65□□□□□ -0.23
NLRC3-202ENST00000359128 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.23
NLRC3-202ENST00000359128 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.23
NLRC3-202ENST00000359128 TBX3O15119 743 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 MEFVO15553 781 aaPredicted RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 FAM200BP0CF97 657 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ATP1A3P13637 1013 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 CAPZA2P47755 286 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 CYTH2Q99418 400 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ING2Q9H160 280 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 CD274Q9NZQ7 290 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 GRID2IPA4D2P6 1211 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ATP8B1O43520 1251 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 SLC11A2P49281 568 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 NLRP11P59045 1033 aaKnown RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ACTR2P61160 394 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 MED21Q13503 144 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 XRRA1Q6P2D8 792 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 C1orf54Q8WWF1 131 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 RUBCNLQ9H714 662 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ZFP69BQ9UJL9 534 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 GTPBP10A4D1E9 387 aaKnown RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 SESN2P58004 480 aaPredicted RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 IZUMO3Q5VZ72 239 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 OR9Q1Q8NGQ5 310 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 MCEEQ96PE7 176 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 EXTL3O43909 919 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 E2F5Q15329 346 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 RBBP8NLQ8NC74 664 aaPredicted RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 SUPT20HL2P0C7V6 817 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 HSPA1AP0DMV8 641 aaKnown RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 HSPA1BP0DMV9 641 aaKnown RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 BLVRAP53004 296 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 ZNF177Q13360 481 aaPredicted RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 MAPRE2Q15555 327 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 CCDC137Q6PK04 289 aaKnown RBP13.64□□□□□ -0.23
NLRC3-202ENST00000359128 REEP2Q9BRK0 252 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 TRIM4Q9C037 500 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 TRAF3IP3Q9Y228 551 aa13.64□□□□□ -0.23
NLRC3-202ENST00000359128 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 NCAM1P13591 858 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 ZRANB3Q5FWF4 1079 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 CLEC10AQ8IUN9 316 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 RFWD2Q8NHY2 731 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 MMEP08473 750 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 SEMA3FQ13275 785 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 P3H1Q32P28 736 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 C11orf96Q7Z7L8 435 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 STX19Q8N4C7 294 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 ZFATQ9P243 1243 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 DPP7Q9UHL4 492 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 TRADDQ15628 312 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 DCAF6Q58WW2 860 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 EFHC1Q5JVL4 640 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 DPP3Q9NY33 737 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 GYG2O15488 501 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 PIGHQ14442 188 aaPredicted RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 CPA4Q9UI42 421 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 SNX5Q9Y5X3 404 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 ZNF500O60304 480 aaPredicted RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 POLD3Q15054 466 aaPredicted RBP13.63□□□□□ -0.23
NLRC3-202ENST00000359128 COBLL1Q53SF7 1204 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 OPTNQ96CV9 577 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
NLRC3-202ENST00000359128 IGSF9BQ9UPX0 1349 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 SYNCRIPO60506 623 aaKnown RBP13.62□□□□□ -0.23
NLRC3-202ENST00000359128 ZC3H11AO75152 810 aaKnown RBP eCLIP13.62□□□□□ -0.23
NLRC3-202ENST00000359128 PDHBP11177 359 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 RGS4P49798 205 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 DHX40Q8IX18 779 aaKnown RBP13.62□□□□□ -0.23
NLRC3-202ENST00000359128 UBA3Q8TBC4 463 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 RFFLQ8WZ73 363 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 KRT35Q92764 455 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 MROH8Q9H579 483 aa13.62□□□□□ -0.23
NLRC3-202ENST00000359128 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms