RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PTGISQ16647 500 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZNF697Q5TEC3 545 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 PHLDB3Q6NSJ2 640 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 DPY19L2P1Q6NXN4 242 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 NOTUMQ6P988 496 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 TRAF7Q6Q0C0 670 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 C15orf39Q6ZRI6 1047 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZBTB33Q86T24 672 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 LMO3Q8TAP4 145 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 CTNNBL1Q8WYA6 563 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 CCDC94Q9BW85 323 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 SEZ6LQ9BYH1 1024 aa11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 CPSF3Q9UKF6 684 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-201ENST00000359005 A0A087WZ62 844 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 XPOTO43592 962 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 ARHGEF15O94989 841 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 C4BPAP04003 597 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 PLEKP08567 350 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 GZMAP12544 262 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 ATICP31939 592 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 ARHGAP25P42331 645 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 CYP27A1Q02318 531 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 CLUL1Q15846 466 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 ENOX2Q16206 610 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 TRIM71Q2Q1W2 868 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 C1orf220Q5T0J3 134 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 CCDC70Q6NSX1 233 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 PSRC1Q6PGN9 363 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 TRIM72Q6ZMU5 477 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 CATSPER4Q7RTX7 472 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 HACE1Q8IYU2 909 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 KIAA0319LQ8IZA0 1049 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 SHC3Q92529 594 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 TRIM11Q96F44 468 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 AGPAT1Q99943 283 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 FDXACB1Q9BRP7 624 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZNF576Q9H609 170 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 PLEKHA5Q9HAU0 1116 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 PTPRHQ9HD43 1115 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 TOPORSQ9NS56 1045 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 SETD4Q9NVD3 440 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 GTF2IRD1Q9UHL9 959 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 CDC23Q9UJX2 597 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 DERAQ9Y315 318 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 MUC3AQ02505 3323 aa11.54□□□□□ -0.56
TRAPPC4-201ENST00000359005 KAT6AQ92794 2004 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 MACROD2A1Z1Q3 448 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 HLA-DRAP01903 254 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 TUBBP07437 444 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 PRLRP16471 622 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 TCP1P17987 556 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 PTPN11Q06124 597 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 NCOA4Q13772 614 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 SLC27A1Q6PCB7 646 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 CRELD2Q6UXH1 353 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 MTERF4Q7Z6M4 381 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 RHOT2Q8IXI1 618 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 THNSL1Q8IYQ7 743 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 FAM71AQ8IYT1 594 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 TAS1R2Q8TE23 839 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 ZBTB45Q96K62 511 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 PDCL3Q9H2J4 239 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 PDE11AQ9HCR9 933 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 SEPT11Q9NVA2 429 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 RNF14Q9UBS8 474 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 LCMT1Q9UIC8 334 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 REXO2Q9Y3B8 237 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 SAR1BQ9Y6B6 198 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 SCN10AQ9Y5Y9 1956 aa11.53□□□□□ -0.56
TRAPPC4-201ENST00000359005 XIRP2A4UGR9 3374 aa11.52□□□□□ -0.56
TRAPPC4-201ENST00000359005 A0A087X0T9 212 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 ANKRD62A6NC57 917 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 EFCAB8A8MWE9 144 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 NBNO60934 754 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 RTN2O75298 545 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 LRRN2O75325 713 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 VTNP04004 478 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 TMEM253P0C7T8 217 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 FAM228BP0C875 321 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 KRT5P13647 590 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 EIF4BP23588 611 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 CRYBB1P53674 252 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 CUL2Q13617 745 aa11.52□□□□□ -0.57
TRAPPC4-201ENST00000359005 ADGRE1Q14246 886 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms