RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ERBB3P21860 1342 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 RALAP11233 206 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 CUL4AQ13619 759 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 RASGRF1Q13972 1273 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SLC44A4Q53GD3 710 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 PGBD3Q8N328 593 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SPATA33Q96N06 139 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 DOLKQ9UPQ8 538 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 CFAP43Q8NDM7 1665 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 HPCAP84074 193 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ZNF200P98182 395 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 GPD1LQ8N335 351 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ASAP3Q8TDY4 903 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 PABPC5Q96DU9 382 aaKnown RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 PIF1Q9H611 641 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 MORC2Q9Y6X9 1032 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ANO9A1A5B4 782 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SERPINB5P36952 375 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 TOB2Q14106 344 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ARHGEF6Q15052 776 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 MEI1Q5TIA1 1274 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 FAM196AQ6ZSG2 479 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 DHX36Q9H2U1 1008 aaKnown RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 NEU2Q9Y3R4 380 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ZBTB5O15062 677 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 RALBP11234 206 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 CDC27P30260 824 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 RPS7P62081 194 aaKnown RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 BFSP2Q13515 415 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SPATA2LQ8IUW3 424 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ZBTB10Q96DT7 871 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 KIAA1586Q9HCI6 787 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
COL11A1-202ENST00000358392 NUDT2P50583 147 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 JADE3Q92613 823 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 FOPNLQ96NB1 174 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 SPASTQ9UBP0 616 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 RSPH10B2B2RC85 870 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 FAM107AO95990 144 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 ALBP02768 609 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 PDGFRBP09619 1106 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 RSPH10BP0C881 870 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 ATP12AP54707 1039 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 OTOAQ7RTW8 1153 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 LRRC71Q8N4P6 559 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 ATPAF2Q8N5M1 289 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 SLC44A5Q8NCS7 719 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 RBM15Q96T37 977 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL11A1-202ENST00000358392 SIKE1Q9BRV8 207 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 RTN2O75298 545 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 PYGMP11217 842 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 LAMC2Q13753 1193 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 EIF2AK1Q9BQI3 630 aaKnown RBP11.71□□□□□ -0.53
COL11A1-202ENST00000358392 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
COL11A1-202ENST00000358392 UTYO14607 1347 aa11.71□□□□□ -0.53
COL11A1-202ENST00000358392 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 AGRPO00253 132 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 ZCCHC18P0CG32 403 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 KCNK10P57789 538 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 CDK17Q00537 523 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 C3orf62Q6ZUJ4 267 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 BBS7Q8IWZ6 715 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 SPRTNQ9H040 489 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 AGO2Q9UKV8 859 aaKnown RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 SPATA2Q9UM82 520 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 AP3B1O00203 1094 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 EIF3HO15372 352 aaKnown RBP eCLIP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 PPP1R37O75864 691 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 GGPS1O95749 300 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 MTHFD1LQ6UB35 978 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 MCPH1Q8NEM0 835 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 MDM1Q8TC05 714 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 ACSF2Q96CM8 615 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 ZHX2Q9Y6X8 837 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 C3orf70A6NLC5 250 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 HSMCR30P0CW71 290 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 FLT3P36888 993 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 FEN1P39748 380 aaKnown RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 HSD17B4P51659 736 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 TWF1Q12792 350 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 TRADDQ15628 312 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 NFIL3Q16649 462 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 AGGF1Q8N302 714 aaeCLIP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 ATL2Q8NHH9 583 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 RFFLQ8WZ73 363 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 CHP1Q99653 195 aa11.71□□□□□ -0.54
COL11A1-202ENST00000358392 PSMC3IPQ9P2W1 217 aaPredicted RBP11.71□□□□□ -0.54
COL11A1-202ENST00000358392 TMA7Q9Y2S6 64 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms