RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 KIAA1328Q86T90 577 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 VPS36Q86VN1 386 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 UBR7Q8N806 425 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 LNX1Q8TBB1 728 aaPredicted RBP18.32■□□□□ 0.52
TPM1-205ENST00000357980 APOL6Q9BWW8 343 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 VRTNQ9H8Y1 702 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 FAM105AQ9NUU6 356 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 DPP3Q9NY33 737 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 TRIM10Q9UDY6 481 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 NAGPAQ9UK23 515 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 CNTN6Q9UQ52 1028 aa18.32■□□□□ 0.52
TPM1-205ENST00000357980 SCN1AP35498 2009 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 SGPL1O95470 568 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 CD4P01730 458 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 KRT19P08727 400 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 KCNE1P15382 129 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 ETF1P62495 437 aaKnown RBP18.31■□□□□ 0.52
TPM1-205ENST00000357980 MBTPS1Q14703 1052 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 NOP9Q86U38 636 aaKnown RBP18.31■□□□□ 0.52
TPM1-205ENST00000357980 SLC47A2Q86VL8 602 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 SLC20A1Q8WUM9 679 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 TRAIPQ9BWF2 469 aa18.31■□□□□ 0.52
TPM1-205ENST00000357980 MGEA5O60502 916 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 TUBB4AP04350 444 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 POLR2BP30876 1174 aaKnown RBP18.3■□□□□ 0.52
TPM1-205ENST00000357980 ATICP31939 592 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 MAGEA1P43355 309 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 ASPAP45381 313 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 DNTTIP2Q5QJE6 756 aaKnown RBP18.3■□□□□ 0.52
TPM1-205ENST00000357980 GLYCTKQ8IVS8 523 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 CAGE1Q8TC20 777 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 FAXDC2Q96IV6 333 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 IRX2Q9BZI1 471 aaPredicted RBP18.3■□□□□ 0.52
TPM1-205ENST00000357980 ACP6Q9NPH0 428 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 ATP8B3O60423 1300 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 PJA2O43164 708 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 STAU1O95793 577 aaKnown RBP18.3■□□□□ 0.52
TPM1-205ENST00000357980 KRT5P13647 590 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 CYP11B1P15538 503 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 NAB2Q15742 525 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 GLRA4Q5JXX5 417 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 CCDC122Q5T0U0 273 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 SMYD5Q6GMV2 418 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 ALKBH5Q6P6C2 394 aaKnown RBP18.3■□□□□ 0.52
TPM1-205ENST00000357980 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 AGPAT1Q99943 283 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 KLK14Q9P0G3 267 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 TUBGCP4Q9UGJ1 667 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 PARP2Q9UGN5 583 aa18.3■□□□□ 0.52
TPM1-205ENST00000357980 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 FANCGO15287 622 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 KRT86O43790 486 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 ZSCAN20P17040 1043 aaPredicted RBP18.29■□□□□ 0.52
TPM1-205ENST00000357980 CHRNB2P17787 502 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 ZNF132P52740 706 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 RBP5P82980 135 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 C10orf76Q5T2E6 689 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
TPM1-205ENST00000357980 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
TPM1-205ENST00000357980 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
TPM1-205ENST00000357980 C18orf25Q96B23 403 aaPredicted RBP18.29■□□□□ 0.52
TPM1-205ENST00000357980 BCO2Q9BYV7 579 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 TSGA10Q9BZW7 698 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 AGAP1Q9UPQ3 857 aa18.29■□□□□ 0.52
TPM1-205ENST00000357980 MEIS3P2A8K0S8 358 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 ZNF623O75123 536 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 CLSTN1O94985 981 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 PDE6CP51160 858 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 KIF5AQ12840 1032 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 SYT10Q6XYQ8 523 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
TPM1-205ENST00000357980 PALB2Q86YC2 1186 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 HPDLQ96IR7 371 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 LUC7LQ9NQ29 371 aaKnown RBP18.28■□□□□ 0.52
TPM1-205ENST00000357980 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
TPM1-205ENST00000357980 DUSP10Q9Y6W6 482 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 TANC1Q9C0D5 1861 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 PTGESO14684 152 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 RAB27AP51159 221 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 LBX1P52954 281 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 WDR72Q3MJ13 1102 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 ZNF667Q5HYK9 610 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 TMEM270Q6UE05 265 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 WDR24Q96S15 920 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 RNF19AQ9NV58 838 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 NXF1Q9UBU9 619 aaKnown RBP18.28■□□□□ 0.52
TPM1-205ENST00000357980 GUCA1BQ9UMX6 200 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 POLIQ9UNA4 740 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 PCDHB4Q9Y5E5 795 aa18.28■□□□□ 0.52
TPM1-205ENST00000357980 A0A0U1RQF3 1178 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 ANO9A1A5B4 782 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 KIF5CO60282 957 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 SELPP16109 830 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
TPM1-205ENST00000357980 TNFAIP3P21580 790 aa18.27■□□□□ 0.52
TPM1-205ENST00000357980 GNG11P61952 73 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms