RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CYP4F22Q6NT55 531 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 COG1Q8WTW3 980 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 COG5Q9UP83 839 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 UMODL1Q5DID0 1318 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 SRGAP2O75044 1071 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 LSM8O95777 96 aaKnown RBP18.43■□□□□ 0.54
VPS13B-201ENST00000355155 MYL3P08590 195 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 NOTUMQ6P988 496 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 TTC39CQ8N584 583 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 RBBP8NLQ8NC74 664 aaPredicted RBP18.43■□□□□ 0.54
VPS13B-201ENST00000355155 LENG1Q96BZ8 264 aaPredicted RBP18.43■□□□□ 0.54
VPS13B-201ENST00000355155 CPB2Q96IY4 423 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 ACAP3Q96P50 834 aa18.43■□□□□ 0.54
VPS13B-201ENST00000355155 EIF4BP23588 611 aaKnown RBP18.42■□□□□ 0.54
VPS13B-201ENST00000355155 FLT3LGP49771 235 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 BRD3Q15059 726 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 SNX27Q96L92 541 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 ZNF518BQ9C0D4 1074 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 ARHGAP39Q9C0H5 1083 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 CNTN3Q9P232 1028 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 GTF2IRD1Q9UHL9 959 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 NFICP08651 508 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 SNX17Q15036 470 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 RPS6KA1Q15418 735 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 JADE1Q6IE81 842 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 FBXO38Q6PIJ6 1188 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 FAM84AQ96KN4 292 aa18.42■□□□□ 0.54
VPS13B-201ENST00000355155 PUF60Q9UHX1 559 aaKnown RBP18.42■□□□□ 0.54
VPS13B-201ENST00000355155 DDX3YO15523 660 aaKnown RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 ATP8B1O43520 1251 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 BUB1BO60566 1050 aaPredicted RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 PAEPP09466 180 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 GSCP56915 257 aaPredicted RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 TRPC3Q13507 836 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 MON1BQ7L1V2 547 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 PCDHB4Q9Y5E5 795 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 ZNF185O15231 689 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 TREHO43280 583 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 NCK2O43639 380 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CAPN15O75808 1086 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 KRT5P13647 590 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 NOMO3P69849 1222 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 PTP4A2Q12974 167 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CLUL1Q15846 466 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 ZNF699Q32M78 642 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CFAP221Q4G0U5 840 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 GLE1Q53GS7 698 aaKnown RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 SCARA3Q6AZY7 606 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 MCOLN2Q8IZK6 566 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CD101Q93033 1021 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 LCMT1Q9UIC8 334 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 V9GYY5 206 aaPredicted RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 MYADML2A6NDP7 307 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 MIF4GDA9UHW6 222 aaKnown RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 TFRCP02786 760 aaKnown RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CTNNA2P26232 953 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 USP8P40818 1118 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 NAP1L1P55209 391 aaKnown RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 BEX3Q00994 111 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 SP3Q02447 781 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 C1QBPQ07021 282 aaKnown RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 KIZQ2M2Z5 673 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 ZNF668Q96K58 619 aaPredicted RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 CCDC94Q9BW85 323 aaPredicted RBP18.41■□□□□ 0.54
VPS13B-201ENST00000355155 OSGEPQ9NPF4 335 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 FAM53CQ9NYF3 392 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 AMFRQ9UKV5 643 aa18.41■□□□□ 0.54
VPS13B-201ENST00000355155 TRIP12Q14669 1992 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 CCDC151A5D8V7 595 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 FTCDO95954 541 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 NOP2P46087 812 aaKnown RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 TFAMQ00059 246 aaKnown RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 PRKCZQ05513 592 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 PTPN11Q06124 597 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 INCA1Q0VD86 236 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 TMEM132DQ14C87 1099 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 TEX35Q5T0J7 233 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 NOA1Q8NC60 698 aaKnown RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 SPATA4Q8NEY3 305 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 CAPNS2Q96L46 248 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 BHMG1C9JSJ3 638 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 GNA15P30679 374 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 MGAT3Q09327 533 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 DEFB115Q30KQ5 88 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 UBXN11Q5T124 520 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 PARD6BQ9BYG5 372 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 ACP6Q9NPH0 428 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 CISHQ9NSE2 258 aa18.4■□□□□ 0.54
VPS13B-201ENST00000355155 ARGLU1Q9NWB6 273 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.4■□□□□ 0.54
VPS13B-201ENST00000355155 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.53
VPS13B-201ENST00000355155 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 KCNE1P15382 129 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 PAFAH1B1P43034 410 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 CAP1Q01518 475 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 TMEM132AQ24JP5 1023 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms