RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 MED14O60244 1454 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 H3BM21 787 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 SMIM22K7EJ46 135 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 ENTPD3O75355 529 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 RHOCP08134 193 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 RFC5P40937 340 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 CDH8P55286 799 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 BBS9Q3SYG4 887 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 GLRA4Q5JXX5 417 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 TIGD7Q6NT04 549 aaPredicted RBP5.4□□□□□ -1.54
CKAP5-202ENST00000354558 CROCCP2Q86T23 111 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 CLIP3Q96DZ5 547 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 CEP19Q96LK0 163 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 TCF25Q9BQ70 676 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 BRINP2Q9C0B6 783 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 ZC4H2Q9NQZ6 224 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 PSD3Q9NYI0 1048 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 CD274Q9NZQ7 290 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 MID2Q9UJV3 735 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 POLR1DQ9Y2S0 133 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 L3MBTL1Q9Y468 752 aa5.4□□□□□ -1.54
CKAP5-202ENST00000354558 ABCA5Q8WWZ7 1642 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 EEF2KO00418 725 aaKnown RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 MPOP05164 745 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 THP07101 528 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 KRT7P08729 469 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PLS3P13797 630 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 MX2P20592 715 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 GNA15P30679 374 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CHRNA3P32297 505 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 SKP1P63208 163 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 SKOR1P84550 965 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 XRCC4Q13426 336 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 EMC2Q15006 297 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 FASTKD1Q53R41 847 aaKnown RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TPGS1Q6ZTW0 290 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 C10orf67Q8IYJ2 551 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 ZNF655Q8N720 491 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 DNAJB3Q8WWF6 145 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 USP13Q92995 863 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 IQCDQ96DY2 449 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 DCBLD2Q96PD2 775 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 KRCC1Q9NPI7 259 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TMEM161AQ9NX61 479 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 EPS15L1Q9UBC2 864 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 EFCAB8A8MWE9 144 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 HMGB3O15347 200 aaKnown RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CCL16O15467 120 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 MAGEC1O60732 1142 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 E2F6O75461 281 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CCNB2O95067 398 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 FGAP02671 866 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CALB1P05937 261 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 FAM200BP0CF97 657 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PCNAP12004 261 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 NCAM1P13591 858 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 AP3M2P53677 418 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 OXCT1P55809 520 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 EFEMP1Q12805 493 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CDC16Q13042 620 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TAF13Q15543 124 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PKN2Q16513 984 aaKnown RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PROSER3Q2NL68 480 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 POM121L1PQ3SYA9 428 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 ATP13A4Q4VNC1 1196 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 NBPF12Q5TAG4 269 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 NAA35Q5VZE5 725 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 NFRKBQ6P4R8 1299 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 MLKLQ8NB16 471 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 IL17REQ8NFR9 667 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 AKT1S1Q96B36 256 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PPWD1Q96BP3 646 aaKnown RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 MAGED4Q96JG8 741 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 DPH5Q9H2P9 285 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 POLMQ9NP87 494 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TRIM10Q9UDY6 481 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PCSK1NQ9UHG2 260 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 AK9Q5TCS8 1911 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 A6NCN8 305 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CHURC1-FNTBB4DL54 471 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 AOC2O75106 756 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 IL18RAPO95256 599 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 MSH3P20585 1137 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PTPN3P26045 913 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 PNPLA4P41247 253 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 USP4Q13107 963 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 ART3Q13508 389 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 GOLGA7BQ2TAP0 167 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 C10orf76Q5T2E6 689 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 FBXL19Q6PCT2 694 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TRMT10CQ7L0Y3 403 aaKnown RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 ARMCX6Q7L4S7 300 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 LCA5Q86VQ0 697 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 TMEM35BQ8NCS4 154 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 CXorf40BQ96DE9 158 aa5.4□□□□□ -1.55
CKAP5-202ENST00000354558 JSRP1Q96MG2 331 aaPredicted RBP5.4□□□□□ -1.55
CKAP5-202ENST00000354558 RPRD1AQ96P16 312 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms