RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 INSL5Q9Y5Q6 135 aa15.78■□□□□ 0.12
PRPF40A-201ENST00000354363 GVINP1Q7Z2Y8 2422 aa15.78■□□□□ 0.12
PRPF40A-201ENST00000354363 TCHHQ07283 1943 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 TICRRQ7Z2Z1 1910 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 EP300Q09472 2414 aaPredicted RBP15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 MATR3P43243 847 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 PFKPQ01813 784 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 TPGS2Q68CL5 300 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 ZNF280DQ6N043 979 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 APPL2Q8NEU8 664 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 CORO1BQ9BR76 489 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 PLA2G2FQ9BZM2 168 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 PLEKHA5Q9HAU0 1116 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 PCDHB8Q9UN66 801 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 R4GN57 208 aa15.77■□□□□ 0.12
PRPF40A-201ENST00000354363 SCN1AP35498 2009 aa15.77■□□□□ 0.11
PRPF40A-201ENST00000354363 F5P12259 2224 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 TTC26A0AVF1 554 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 CLTAP09496 248 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 SP9P0CG40 484 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 LRPAP1P30533 357 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 SPAG1Q07617 926 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 HAUS6Q7Z4H7 955 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 LRRC15Q8TF66 581 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 KCNN1Q92952 543 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 TCEAL4Q96EI5 215 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 BICD1Q96G01 975 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 SEMA4AQ9H3S1 761 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 ODF2LQ9ULJ1 636 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 MTF2Q9Y483 593 aaPredicted RBP15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 COL4A2P08572 1712 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 H0YCG3 227 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 SLC26A4O43511 780 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 TNFSF9P41273 254 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 ADCY1Q08828 1119 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 TANGO2Q6ICL3 276 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 KIF12Q96FN5 646 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 AK8Q96MA6 479 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 REEP2Q9BRK0 252 aa15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 AFF4Q9UHB7 1163 aaKnown RBP15.76■□□□□ 0.11
PRPF40A-201ENST00000354363 TSC2P49815 1807 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 M0QZQ0 153 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 NRG2O14511 850 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 FCARP24071 287 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 MARCKSP29966 332 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 CCR2P41597 374 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 UBXN2BQ14CS0 331 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 ZBTB6Q15916 424 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 GPBP1Q86WP2 473 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 MAML2Q8IZL2 1156 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 KCNG4Q8TDN1 519 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 ELSPBP1Q96BH3 223 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 CALML4Q96GE6 196 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 OSBPL6Q9BZF3 934 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 BLOC1S4Q9NUP1 217 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 MAFFQ9ULX9 164 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 UBQLN1Q9UMX0 589 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
PRPF40A-201ENST00000354363 DCHS1Q96JQ0 3298 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 FAM170BA6NMN3 283 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 LACTBL1A8MY62 500 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 ZNF197O14709 1029 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 FAM189A1O60320 539 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 MICAL2O94851 1124 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 PIGRP01833 764 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 CPB1P15086 417 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 CYP3A5P20815 502 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 CD72P21854 359 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 UBA7P41226 1012 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 LIG4P49917 911 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 PPP2R3AQ06190 1150 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 TWF1Q12792 350 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 DHX8Q14562 1220 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 OTOGLQ3ZCN5 2332 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 ZBTB41Q5SVQ8 909 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 RNF19BQ6ZMZ0 732 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 PDZD4Q76G19 769 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 HS6ST3Q8IZP7 471 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 ELMOD1Q8N336 334 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 BCO2Q9BYV7 579 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 CEP72Q9P209 647 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 TBX20Q9UMR3 447 aa15.74■□□□□ 0.11
PRPF40A-201ENST00000354363 K7ENM7 598 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 HNRNPDLO14979 420 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 MOSPD3O75425 235 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 OAZ2O95190 189 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 AARSP49588 968 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 GUCY2FP51841 1108 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 ZNF131P52739 623 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 YWHAHQ04917 246 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 MCM6Q14566 821 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 ENOX2Q16206 610 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 KYAT1Q16773 422 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 FAM78AQ5JUQ0 283 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 CYP4A22Q5TCH4 519 aa15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 LARP1BQ659C4 914 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-201ENST00000354363 ZC3H14Q6PJT7 736 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms