RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TRPV6Q9H1D0 765 aa22.04■■□□□ 1.12
TRIM4-202ENST00000354241 DPP3Q9NY33 737 aa22.04■■□□□ 1.12
TRIM4-202ENST00000354241 PARP2Q9UGN5 583 aa22.04■■□□□ 1.12
TRIM4-202ENST00000354241 NOCTQ9UK39 431 aaKnown RBP22.04■■□□□ 1.12
TRIM4-202ENST00000354241 NENFQ9UMX5 172 aa22.04■■□□□ 1.12
TRIM4-202ENST00000354241 IPPQ9Y573 584 aa22.04■■□□□ 1.12
TRIM4-202ENST00000354241 CYP11B1P15538 503 aa22.03■■□□□ 1.12
TRIM4-202ENST00000354241 ACO1P21399 889 aaKnown RBP22.03■■□□□ 1.12
TRIM4-202ENST00000354241 TRIM71Q2Q1W2 868 aaKnown RBP22.03■■□□□ 1.12
TRIM4-202ENST00000354241 SCARA5Q6ZMJ2 495 aa22.03■■□□□ 1.12
TRIM4-202ENST00000354241 SECISBP2LQ93073 1101 aaKnown RBP22.03■■□□□ 1.12
TRIM4-202ENST00000354241 TMCO5BA8MYB1 307 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 GPR182O15218 404 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 GHRP10912 638 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 POLR2BP30876 1174 aaKnown RBP22.02■■□□□ 1.12
TRIM4-202ENST00000354241 TAF4BQ92750 862 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 DEFB118Q96PH6 123 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 OSBPL7Q9BZF2 842 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 RNF39Q9H2S5 420 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 KLK14Q9P0G3 267 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 ITGA11Q9UKX5 1188 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 AGAP1Q9UPQ3 857 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 DERAQ9Y315 318 aa22.02■■□□□ 1.12
TRIM4-202ENST00000354241 GLRA4Q5JXX5 417 aa22.02■■□□□ 1.11
TRIM4-202ENST00000354241 FBXO47Q5MNV8 452 aa22.02■■□□□ 1.11
TRIM4-202ENST00000354241 TMEM270Q6UE05 265 aa22.02■■□□□ 1.11
TRIM4-202ENST00000354241 SLC43A3Q8NBI5 491 aa22.02■■□□□ 1.11
TRIM4-202ENST00000354241 SMG8Q8ND04 991 aaKnown RBP22.02■■□□□ 1.11
TRIM4-202ENST00000354241 ZMAT2Q96NC0 199 aaKnown RBP22.02■■□□□ 1.11
TRIM4-202ENST00000354241 AGO3Q9H9G7 860 aaKnown RBP22.02■■□□□ 1.11
TRIM4-202ENST00000354241 PAK6Q9NQU5 681 aaPredicted RBP22.02■■□□□ 1.11
TRIM4-202ENST00000354241 CNTN3Q9P232 1028 aa22.02■■□□□ 1.11
TRIM4-202ENST00000354241 NXF1Q9UBU9 619 aaKnown RBP22.02■■□□□ 1.11
TRIM4-202ENST00000354241 ARVCFO00192 962 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 CALCAP01258 141 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 MMEP08473 750 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 CCL5P13501 91 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 CHRNB2P17787 502 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 CD52P31358 61 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 ZNF667Q5HYK9 610 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 ZNF618Q5T7W0 954 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 CXorf38Q8TB03 319 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 RNF208Q9H0X6 261 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 CHST12Q9NRB3 414 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 RNF19AQ9NV58 838 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 POLIQ9UNA4 740 aa22.01■■□□□ 1.11
TRIM4-202ENST00000354241 FAM170AA1A519 330 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 DNM1LO00429 736 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 CD58P19256 250 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 RBP5P82980 135 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 PAK2Q13177 524 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 FAM26DQ5JW98 314 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 ALKAL1Q6UXT8 129 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 PALB2Q86YC2 1186 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 RBBP8NLQ8NC74 664 aaPredicted RBP22■■□□□ 1.11
TRIM4-202ENST00000354241 ERVK-5Q9HDB9 667 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 PADI3Q9ULW8 664 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 PCDHB2Q9Y5E7 798 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 MOCS3O95396 460 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 H2AFZP0C0S5 128 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 ZSCAN20P17040 1043 aaPredicted RBP22■■□□□ 1.11
TRIM4-202ENST00000354241 ATICP31939 592 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 ASPAP45381 313 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 NAP1L1P55209 391 aaKnown RBP22■■□□□ 1.11
TRIM4-202ENST00000354241 BPIFB4P59827 614 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 CDR2Q01850 454 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 LPIN1Q14693 890 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 WDR72Q3MJ13 1102 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 H2AFVQ71UI9 128 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 BEST2Q8NFU1 509 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 TUBGCP4Q9UGJ1 667 aa22■■□□□ 1.11
TRIM4-202ENST00000354241 BUB1O43683 1085 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 URI1O94763 535 aaPredicted RBP21.99■■□□□ 1.11
TRIM4-202ENST00000354241 WEE2P0C1S8 567 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 FMO1Q01740 532 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 UBR7Q8N806 425 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 HPDLQ96IR7 371 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 CISHQ9NSE2 258 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 FAM105AQ9NUU6 356 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 TAS2R14Q9NYV8 317 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 SALL4Q9UJQ4 1053 aa21.99■■□□□ 1.11
TRIM4-202ENST00000354241 DNAH12Q6ZR08 3092 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 CAND2O75155 1236 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 CKBP12277 381 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 C1QTNF8P60827 252 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 DDX1Q92499 740 aaKnown RBP21.98■■□□□ 1.11
TRIM4-202ENST00000354241 C18orf25Q96B23 403 aaPredicted RBP21.98■■□□□ 1.11
TRIM4-202ENST00000354241 PCDHB18PQ96TA0 734 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 CNTN6Q9UQ52 1028 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 MYH10P35580 1976 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 CTAGE9A4FU28 777 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 RIOK3O14730 519 aaKnown RBP21.98■■□□□ 1.11
TRIM4-202ENST00000354241 TACC1O75410 805 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 GALCP54803 685 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 ZBTB6Q15916 424 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 INTUQ9ULD6 942 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 UBQLN1Q9UMX0 589 aaKnown RBP21.98■■□□□ 1.11
TRIM4-202ENST00000354241 CAPN6Q9Y6Q1 641 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 ATP8B3O60423 1300 aa21.98■■□□□ 1.11
TRIM4-202ENST00000354241 BRCA2P51587 3418 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms