RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 VCLP18206 1134 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 PRKCIP41743 596 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 GYG1P46976 350 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 CCT8P50990 548 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 PDK3Q15120 406 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 ZNF423Q2M1K9 1284 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 FAM182BQ5T319 152 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 DEPDC1Q5TB30 811 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 C16orf87Q6PH81 154 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 MTDHQ86UE4 582 aaKnown RBP11.22□□□□□ -0.61
PKP1-202ENST00000352845 LRRC6Q86X45 466 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 DZIP1Q86YF9 867 aaKnown RBP11.22□□□□□ -0.61
PKP1-202ENST00000352845 ERI1Q8IV48 349 aaKnown RBP11.22□□□□□ -0.61
PKP1-202ENST00000352845 CCDC110Q8TBZ0 833 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 LRRC27Q9C0I9 530 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 SENP1Q9P0U3 644 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 UVRAGQ9P2Y5 699 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 NR2E1Q9Y466 385 aa11.22□□□□□ -0.61
PKP1-202ENST00000352845 COL5A3P25940 1745 aaPredicted RBP11.22□□□□□ -0.61
PKP1-202ENST00000352845 SCN7AQ01118 1682 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 A0A1W2PRG0 241 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 BUD23O43709 281 aaKnown RBP11.21□□□□□ -0.61
PKP1-202ENST00000352845 SPAG7O75391 227 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 RARBP10826 455 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 NFKBIAP25963 317 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 WDR4P57081 412 aaKnown RBP11.21□□□□□ -0.61
PKP1-202ENST00000352845 ACTR3P61158 418 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 PTK2Q05397 1052 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 SRRM1Q8IYB3 904 aaKnown RBP11.21□□□□□ -0.61
PKP1-202ENST00000352845 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
PKP1-202ENST00000352845 CCT7Q99832 543 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 OSBPL8Q9BZF1 889 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 WHRNQ9P202 907 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 TDRKHQ9Y2W6 561 aaKnown RBP11.21□□□□□ -0.61
PKP1-202ENST00000352845 TTLL3Q9Y4R7 772 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.61
PKP1-202ENST00000352845 CYTH3O43739 400 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 TFAP2AP05549 437 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 SMIM18P0DKX4 95 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 ESRRAP11474 423 aaPredicted RBP11.21□□□□□ -0.62
PKP1-202ENST00000352845 CTNNA2P26232 953 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 HOXA10P31260 410 aaPredicted RBP11.21□□□□□ -0.62
PKP1-202ENST00000352845 STIP1P31948 543 aaKnown RBP11.21□□□□□ -0.62
PKP1-202ENST00000352845 CETN2P41208 172 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 STAT4Q14765 748 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 TMEM266Q2M3C6 531 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 ZNF362Q5T0B9 420 aaPredicted RBP11.21□□□□□ -0.62
PKP1-202ENST00000352845 UGT2A3Q6UWM9 527 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 PEX5LQ8IYB4 626 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 PPP1R14CQ8TAE6 165 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 PYROXD1Q8WU10 500 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 SCFD1Q8WVM8 642 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 CEP63Q96MT8 703 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 DRC3Q9H069 523 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 Q9H521 79 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
PKP1-202ENST00000352845 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.62
PKP1-202ENST00000352845 HEY1Q9Y5J3 304 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.62
PKP1-202ENST00000352845 NCANO14594 1321 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 NPHP3-ACAD11A0A0J9YXS1 232 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 IQCA1LA6NCM1 817 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 EIF3FO00303 357 aaPredicted RBP11.2□□□□□ -0.62
PKP1-202ENST00000352845 ZNF12P17014 697 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 PFKPQ01813 784 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 CAV1Q03135 178 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 ARID5AQ03989 594 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 MMEL1Q495T6 779 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 UBAP2Q5T6F2 1119 aaKnown RBP11.2□□□□□ -0.62
PKP1-202ENST00000352845 ZNF571Q7Z3V5 609 aaPredicted RBP11.2□□□□□ -0.62
PKP1-202ENST00000352845 IRF2BP2Q7Z5L9 587 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 TMPRSS6Q8IU80 811 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.2□□□□□ -0.62
PKP1-202ENST00000352845 FAM172AQ8WUF8 416 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 PRPF31Q8WWY3 499 aaKnown RBP11.2□□□□□ -0.62
PKP1-202ENST00000352845 GANQ9H2C0 597 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 TRPC7Q9HCX4 862 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 IL17RBQ9NRM6 502 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 ARL8BQ9NVJ2 186 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 DKK3Q9UBP4 350 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 AK5Q9Y6K8 562 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 MYMKA6NI61 221 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
PKP1-202ENST00000352845 PEX1O43933 1283 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 CSDE1O75534 798 aaKnown RBP11.2□□□□□ -0.62
PKP1-202ENST00000352845 CAMTA2O94983 1202 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 ACSL3O95573 720 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 OR52Z1P0C646 297 aa11.2□□□□□ -0.62
PKP1-202ENST00000352845 VDRP11473 427 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms