RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 H7C1D1 291 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 K7EPI3 171 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 ZBTB43O43298 467 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 RNASEH1O60930 286 aaKnown RBP12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 MRPS15P82914 257 aaKnown RBP12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 KCNJ8Q15842 424 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 TIGD2Q4W5G0 525 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 HABP4Q5JVS0 413 aaKnown RBP12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 C1orf146Q5VVC0 180 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 HELQQ8TDG4 1101 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 ISCUQ9H1K1 167 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 VPS37BQ9H9H4 285 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 UVRAGQ9P2Y5 699 aa12.89□□□□□ -0.35
CTNNB1-201ENST00000349496 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 CIAO1O76071 339 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 EIF2S1P05198 315 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 MX2P20592 715 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 CIITAP33076 1130 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 PGM1P36871 562 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 PRCPP42785 496 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 ITGADQ13349 1161 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 Q6ZNX1 250 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 LPCAT2Q7L5N7 544 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 SLC38A6Q8IZM9 456 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 LILRB1Q8NHL6 650 aaPredicted RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 MRPL40Q9NQ50 206 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 TLL2Q9Y6L7 1015 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 PTPN4P29074 926 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 SKIV2L2P42285 1042 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 EARS2Q5JPH6 523 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 ICA1LQ8NDH6 482 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 EME1Q96AY2 570 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 EBF3Q9H4W6 596 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 TMEM120BA0PK00 339 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 RCCD1A6NED2 376 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 CCDC22O60826 627 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 ATF4P18848 351 aaPredicted RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 CYP7A1P22680 504 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 SLC5A3P53794 718 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 MRPL28Q13084 256 aaKnown RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 CITED4Q96RK1 184 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.352e-6■■□□□ 13.1
CTNNB1-201ENST00000349496 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 ZNF287Q9HBT7 754 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 PCDHGA8Q9Y5G5 932 aa12.88□□□□□ -0.35
CTNNB1-201ENST00000349496 RNF225M0QZC1 329 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 KMOO15229 486 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 TNFRSF8P28908 595 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 KRT6CP48668 564 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 DSTNP60981 165 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 YWHAGP61981 247 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ACSBG2Q5FVE4 666 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PLEKHA7Q6IQ23 1121 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CENPSQ8N2Z9 138 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 INPP5DQ92835 1189 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 DMTF1Q9Y222 760 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SNPHO15079 494 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CYP2D6P10635 497 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CPA3P15088 417 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CHN2P52757 468 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 NUP107P57740 925 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PDK3Q15120 406 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 RGS21Q2M5E4 152 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ASRGL1Q7L266 308 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 CROCCP2Q86T23 111 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 LINC00469Q8N7U9 141 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 TRIM47Q96LD4 638 aa12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 ZNF277Q9NRM2 450 aaPredicted RBP12.87□□□□□ -0.35
CTNNB1-201ENST00000349496 SEPT11Q9NVA2 429 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms