RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DBN1Q16643 649 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 QRICH1Q2TAL8 776 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 CERKLQ49MI3 558 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 FYB2Q5VWT5 728 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 OTOAQ7RTW8 1153 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 ST13P4Q8IZP2 240 aaPredicted RBP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 NAT14Q8WUY8 206 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 HIC2Q96JB3 615 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 TRAIPQ9BWF2 469 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 EPB41L1Q9H4G0 881 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 METTL5Q9NRN9 209 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 DMAC2Q9NW81 257 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 NYAP2Q9P242 653 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 APEX2Q9UBZ4 518 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 ASIC3Q9UHC3 531 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 DNAJC12Q9UKB3 198 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 RABGAP1Q9Y3P9 1069 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 TAF1LQ8IZX4 1826 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 MEIS2O14770 477 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 FSCN2O14926 492 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 TGFB1I1O43294 461 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 DNAJC6O75061 913 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 HAUS5O94927 633 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 TROVE2P10155 538 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 BCRP11274 1271 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 SHMT1P34896 483 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 RFC4P35249 363 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 NEK3P51956 506 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 RAP1GDS1P52306 607 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 INHBCP55103 352 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 USP46P62068 366 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 DSG1Q02413 1049 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 PABPC4Q13310 644 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 TMED2Q15363 201 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 ARHGAP24Q8N264 748 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 WDR60Q8WVS4 1066 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 IRGQQ8WZA9 623 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 RPGRQ92834 1020 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 PPP2R3CQ969Q6 453 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 MCUR1Q96AQ8 359 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 NSL1Q96IY1 281 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 TTC25Q96NG3 672 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 ECSITQ9BQ95 431 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 GRID1Q9ULK0 1009 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 FRMD4BQ9Y2L6 1034 aa10.94□□□□□ -0.66
CHRNA1-202ENST00000348749 BTBD19C9JJ37 291 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 GNPATO15228 680 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 ZCCHC18P0CG32 403 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 STAT3P40763 770 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 CASP4P49662 377 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 GPC5P78333 572 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 KRT72Q14CN4 511 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 CEP128Q6ZU80 1094 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 BBOF1Q8ND07 529 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 GRK7Q8WTQ7 553 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 LENG9Q96B70 501 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 AMNQ9BXJ7 453 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 INTS2Q9H0H0 1204 aaKnown RBP10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 ARL8BQ9NVJ2 186 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 VAV3Q9UKW4 847 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 NUMBLQ9Y6R0 609 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 ZNF536O15090 1300 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 LTBP1Q14766 1721 aa10.93□□□□□ -0.66
CHRNA1-202ENST00000348749 BTAF1O14981 1849 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SMIM31A0A1B0GVY4 71 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PMM2O15305 246 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SPAG7O75391 227 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 FAM13AO94988 1023 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ITGA2BP08514 1039 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SPATA31D3P0C874 917 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 VAV1P15498 845 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PSMC6P62333 389 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ADCY1Q08828 1119 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ITGA9Q13797 1035 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PRR16Q569H4 304 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 RINT1Q6NUQ1 792 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 CCDC174Q6PII3 467 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 USP17L6PQ6QN14 398 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SPATA31D4Q6ZUB0 917 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ACAD11Q709F0 780 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms