RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZNF365Q70YC5 407 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 PPFIBP1Q86W92 1011 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 RSPH1Q8WYR4 309 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 TOP1MTQ969P6 601 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.13■■■□□ 2.255e-8■■■■■ 144.6
SSBP4-202ENST00000348495 KANSL3Q9P2N6 904 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 FHOD1Q9Y613 1164 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 FGBP02675 491 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 AMHP03971 560 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 RFX1P22670 979 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 ATICP31939 592 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 NOP14P78316 857 aaKnown RBP29.12■■■□□ 2.25
SSBP4-202ENST00000348495 TMEM240Q5SV17 173 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 IQCEQ6IPM2 695 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 SPOPLQ6IQ16 392 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 OTOP2Q7RTS6 562 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 URGCPQ8TCY9 931 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 TATDN2Q93075 761 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 IMPG2Q9BZV3 1241 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 NUB1Q9Y5A7 615 aa29.12■■■□□ 2.25
SSBP4-202ENST00000348495 PPEF2O14830 753 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 DEFB103AP81534 67 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 PSRC1Q6PGN9 363 aaPredicted RBP29.11■■■□□ 2.25
SSBP4-202ENST00000348495 LRRC52Q8N7C0 313 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 CPLX3Q8WVH0 158 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 BAP1Q92560 729 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 TBC1D13Q9NVG8 400 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 GATMP50440 423 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 DSC1Q08554 894 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 TUSC3Q13454 348 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 ZNF699Q32M78 642 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 CCDC150Q8NCX0 1101 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 HPDLQ96IR7 371 aa29.11■■■□□ 2.25
SSBP4-202ENST00000348495 COL4A6Q14031 1691 aa29.1■■■□□ 2.25
SSBP4-202ENST00000348495 GCNT1Q02742 428 aa29.1■■■□□ 2.25
SSBP4-202ENST00000348495 ABI1Q8IZP0 508 aa29.1■■■□□ 2.25
SSBP4-202ENST00000348495 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.1■■■□□ 2.252e-8■□□□□ 9.9
SSBP4-202ENST00000348495 UBE2TQ9NPD8 197 aaPredicted RBP29.1■■■□□ 2.25
SSBP4-202ENST00000348495 DNAJC12Q9UKB3 198 aa29.1■■■□□ 2.25
SSBP4-202ENST00000348495 LUC7L2Q9Y383 392 aaKnown RBP29.1■■■□□ 2.25
SSBP4-202ENST00000348495 FNDC1Q4ZHG4 1894 aaPredicted RBP29.1■■■□□ 2.25
SSBP4-202ENST00000348495 MFAP3LO75121 409 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 DGKIO75912 1065 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 RPL9P32969 192 aaKnown RBP29.09■■■□□ 2.25
SSBP4-202ENST00000348495 ZBED6P86452 979 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 ARID5BQ14865 1188 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 RRAGAQ7L523 313 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 CCDC186Q7Z3E2 898 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 TC2NQ8N9U0 490 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 KREMEN1Q96MU8 473 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 NLRC4Q9NPP4 1024 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 SCN1AP35498 2009 aa29.09■■■□□ 2.25
SSBP4-202ENST00000348495 GOLGA6L6A8MZA4 724 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 AKR1B15C9JRZ8 316 aaPredicted RBP29.08■■■□□ 2.25
SSBP4-202ENST00000348495 B4GALT3O60512 393 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 TPM1P09493 284 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 JAM2P57087 298 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 CACNA2D4Q7Z3S7 1137 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 PPM1KQ8N3J5 372 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 KAT5Q92993 513 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 FAXDC2Q96IV6 333 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 LBHD1Q9BQE6 289 aaPredicted RBP29.08■■■□□ 2.25
SSBP4-202ENST00000348495 R3HCC1Q9Y3T6 440 aaKnown RBP29.08■■■□□ 2.25
SSBP4-202ENST00000348495 DDHD2O94830 711 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 UPP2O95045 317 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 ADKP55263 362 aaKnown RBP29.08■■■□□ 2.25
SSBP4-202ENST00000348495 GSDMDP57764 484 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 GOLGA8FQ08AF8 430 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 GOLGA8DPQ0D2H9 430 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 UPP1Q16831 310 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 ZNF280BQ86YH2 543 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 CNGA4Q8IV77 575 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 FAM81BQ96LP2 452 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 STK33Q9BYT3 514 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 RC3H2Q9HBD1 1191 aaKnown RBP29.08■■■□□ 2.25
SSBP4-202ENST00000348495 CACNG4Q9UBN1 327 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 NR2E3Q9Y5X4 410 aa29.08■■■□□ 2.25
SSBP4-202ENST00000348495 PTPRSQ13332 1948 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 KRT9P35527 623 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 PNPLA4P41247 253 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 KCNJ6P48051 423 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 CLCNKBP51801 687 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 MYO1EQ12965 1108 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 ENOSF1Q7L5Y1 443 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 COLGALT2Q8IYK4 626 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 HERVK_113Q902F9 699 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 DDX27Q96GQ7 796 aaKnown RBP29.07■■■□□ 2.24
SSBP4-202ENST00000348495 UROC1Q96N76 676 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 MRPL9Q9BYD2 267 aaKnown RBP29.07■■■□□ 2.24
SSBP4-202ENST00000348495 GPR88Q9GZN0 384 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 NIF3L1Q9GZT8 377 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 MYO6Q9UM54 1294 aa29.07■■■□□ 2.24
SSBP4-202ENST00000348495 CASTOR2A6NHX0 329 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 CAPN15O75808 1086 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 CUL2Q13617 745 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 WDR72Q3MJ13 1102 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 ZNF667Q5HYK9 610 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 ZNF689Q96CS4 500 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-202ENST00000348495 ZNF560Q96MR9 790 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 DNAJC7Q99615 494 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms