RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 KIAA1841Q6NSI8 718 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 CNNM4Q6P4Q7 775 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
RAB5C-201ENST00000346213 EPM2AIP1Q7L775 607 aaPredicted RBP17.47■□□□□ 0.39
RAB5C-201ENST00000346213 MTRRQ9UBK8 725 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 SEL1LQ9UBV2 794 aa17.47■□□□□ 0.39
RAB5C-201ENST00000346213 PTPRJQ12913 1337 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 GOLGA8IPA6NC78 632 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 GOLGA8JA6NMD2 632 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 PAPLNO95428 1278 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 CAVIN2O95810 425 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 GLUD1P00367 558 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 ADH1AP07327 375 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 PRR29P0C7W0 189 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 AFMP43652 599 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 APBB1IPQ7Z5R6 666 aaPredicted RBP17.46■□□□□ 0.39
RAB5C-201ENST00000346213 GPR149Q86SP6 731 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 PDLIM2Q96JY6 352 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 UROC1Q96N76 676 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 C7orf25Q9BPX7 421 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 DZANK1Q9NVP4 752 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 WDFY4Q6ZS81 3184 aa17.46■□□□□ 0.39
RAB5C-201ENST00000346213 LRPAP1P30533 357 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 ASIC1P78348 528 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 MRPL58Q14197 206 aaKnown RBP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 POTEHQ6S545 545 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 HVCN1Q96D96 273 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 FAM212AQ96EL1 285 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 PCIF1Q9H4Z3 704 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 SFXN1Q9H9B4 322 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 STK39Q9UEW8 545 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 FBXW11Q9UKB1 542 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 AGO2Q9UKV8 859 aaKnown RBP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 KCNH3Q9ULD8 1083 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 FAM50BQ9Y247 325 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 TIMM13Q9Y5L4 95 aaPredicted RBP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 TSC2P49815 1807 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 TGFB1I1O43294 461 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 VNN2O95498 520 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 OR1D2P34982 312 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 AARSP49588 968 aaKnown RBP eCLIP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 ITIH3Q06033 890 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 PPP2R3AQ06190 1150 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 VARS2Q5ST30 1063 aaKnown RBP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 SPATA1Q5VX52 437 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 PPFIBP1Q86W92 1011 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 ELOA2Q8IYF1 753 aaPredicted RBP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 GPR65Q8IYL9 337 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 CXorf38Q8TB03 319 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 RPF1Q9H9Y2 349 aaKnown RBP17.45■□□□□ 0.38
RAB5C-201ENST00000346213 PLEKHA5Q9HAU0 1116 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 SLC38A7Q9NVC3 462 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 FAM13BQ9NYF5 915 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 CDY1Q9Y6F8 540 aa17.45■□□□□ 0.38
RAB5C-201ENST00000346213 CCDC195A0A1B0GUA6 201 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 SRGAP2BP0DMP2 458 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 NTHL1P78549 312 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 ANO6Q4KMQ2 910 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 KREMEN2Q8NCW0 462 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 ST13P5Q8NFI4 369 aaPredicted RBP17.44■□□□□ 0.38
RAB5C-201ENST00000346213 SCFD1Q8WVM8 642 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 PAGE5Q96GU1 130 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 SUSD3Q96L08 255 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 ACCSQ96QU6 501 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 FAM213AQ9BRX8 229 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 CUEDC2Q9H467 287 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 KIAA1468Q9P260 1216 aa17.44■□□□□ 0.38
RAB5C-201ENST00000346213 WDR27A2RRH5 827 aa17.43■□□□□ 0.38
RAB5C-201ENST00000346213 CDR1P51861 262 aa17.43■□□□□ 0.38
RAB5C-201ENST00000346213 BMS1Q14692 1282 aaKnown RBP17.43■□□□□ 0.38
RAB5C-201ENST00000346213 STX1AQ16623 288 aa17.43■□□□□ 0.38
RAB5C-201ENST00000346213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.43■□□□□ 0.38
RAB5C-201ENST00000346213 ANO9A1A5B4 782 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 ASGR2P07307 311 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 OR4Q2P0C623 313 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 RPL9P32969 192 aaKnown RBP17.42■□□□□ 0.38
RAB5C-201ENST00000346213 ROR1Q01973 937 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 RAB33AQ14088 237 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 C9orf57Q5W0N0 161 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 UNC13DQ70J99 1090 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 CCDC65Q8IXS2 484 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 KIAA0895Q8NCT3 520 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 CMASQ8NFW8 434 aaPredicted RBP17.42■□□□□ 0.38
RAB5C-201ENST00000346213 TMEM209Q96SK2 561 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 LRFN3Q9BTN0 628 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 FBXL5Q9UKA1 691 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 UBQLN1Q9UMX0 589 aaKnown RBP17.42■□□□□ 0.38
RAB5C-201ENST00000346213 SSX2IPQ9Y2D8 614 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 M0QZQ0 153 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 DCXO43602 365 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 ZMYND10O75800 440 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 SEC24AO95486 1093 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 SLFN14P0C7P3 912 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 SCP2P22307 547 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
RAB5C-201ENST00000346213 LMBRD2Q68DH5 695 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms