RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ANKRD65E5RJM6 399 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 ENO3P13929 434 aaPredicted RBP20.27■□□□□ 0.84
HDAC4-201ENST00000345617 NECTIN1Q15223 517 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 LINC00523Q86TU6 105 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 PTPRN2Q92932 1015 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 ZCCHC17Q9NP64 241 aaKnown RBP20.27■□□□□ 0.84
HDAC4-201ENST00000345617 AMACRQ9UHK6 382 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.843e-6■■■■■ 138.7
HDAC4-201ENST00000345617 UBXN8O00124 270 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 ZBTB5O15062 677 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 RGS5O15539 181 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 IRAK1P51617 712 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 CDH6P55285 790 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 PTK7Q13308 1070 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 EDC3Q96F86 508 aaKnown RBP20.27■□□□□ 0.84
HDAC4-201ENST00000345617 LRCH1Q9Y2L9 728 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 APRTP07741 180 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 RAD51Q06609 339 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 TBL3Q12788 808 aaKnown RBP20.27■□□□□ 0.84
HDAC4-201ENST00000345617 SUGP1Q8IWZ8 645 aaKnown RBP20.27■□□□□ 0.84
HDAC4-201ENST00000345617 BTN2A2Q8WVV5 523 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 STILQ15468 1287 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 LRRC36Q1X8D7 754 aa20.27■□□□□ 0.84
HDAC4-201ENST00000345617 C3orf70A6NLC5 250 aaPredicted RBP20.27■□□□□ 0.83
HDAC4-201ENST00000345617 CAND2O75155 1236 aa20.27■□□□□ 0.83
HDAC4-201ENST00000345617 STAT3P40763 770 aa20.27■□□□□ 0.83
HDAC4-201ENST00000345617 XPO7Q9UIA9 1087 aaKnown RBP20.27■□□□□ 0.83
HDAC4-201ENST00000345617 HNRNPH1P31943 449 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 GPC3P51654 580 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 CABLES1Q8TDN4 633 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 GLMNQ92990 594 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 BTG4Q9NY30 223 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 ERAP1Q9NZ08 941 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 DNALI1O14645 258 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 TRIM66O15016 1216 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 NPEPPSP55786 919 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 EIF3EP60228 445 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 MEI1Q5TIA1 1274 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 ISCUQ9H1K1 167 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 PLEKHA5Q9HAU0 1116 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 KRT76Q01546 638 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 UNC45AQ9H3U1 944 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 BIRC5O15392 142 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 MTRF1O75570 445 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 SNRPAP09012 282 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 MTFR1Q15390 333 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 SNRPFP62306 86 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 MAPRE1Q15691 268 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 PTGISQ16647 500 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 PNMA3Q9UL41 463 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 KCNN4O15554 427 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 GNL1P36915 607 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 KRT73Q86Y46 540 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 SPDYAQ5MJ70 313 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 POP5Q969H6 163 aaKnown RBP20.26■□□□□ 0.83
HDAC4-201ENST00000345617 PIGUQ9H490 435 aa20.26■□□□□ 0.83
HDAC4-201ENST00000345617 CYTH3O43739 400 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 NCALDP61601 193 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 PDAP1Q13442 181 aaKnown RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 ZFP1Q6P2D0 407 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 PIGSQ96S52 555 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 ITGA1P56199 1179 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 GEMIN4P57678 1058 aaKnown RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 FAM102AQ5T9C2 384 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 GALNT4Q8N4A0 578 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 ARHGEF3Q9NR81 526 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 HSPBP1Q9NZL4 362 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 TNFAIP8O95379 198 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 MTMR1Q13613 665 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 CCDC149Q6ZUS6 474 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 FAM45AQ8TCE6 357 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 MMADHCQ9H3L0 296 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 GDAQ9Y2T3 454 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 FKBP6O75344 327 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 ABCB1P08183 1280 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 RGS4P49798 205 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 CEP44Q9C0F1 390 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 XPO1O14980 1071 aaKnown RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 TM9SF1O15321 606 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 OR6B3Q8NGW1 331 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 NQO1P15559 274 aaKnown RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 PLEKHA7Q6IQ23 1121 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 CCDC60Q8IWA6 550 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 WNK4Q96J92 1243 aa20.25■□□□□ 0.83
HDAC4-201ENST00000345617 MRPL4Q9BYD3 311 aaKnown RBP20.25■□□□□ 0.83
HDAC4-201ENST00000345617 FNTAP49354 379 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 WDR93Q6P2C0 686 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 CCNI2Q6ZMN8 369 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-201ENST00000345617 SPATA31E1Q6ZUB1 1445 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 PHF20L1A8MW92 1017 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 ARHGAP22Q7Z5H3 698 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 SULF1Q8IWU6 871 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 INPP5DQ92835 1189 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 SH3KBP1Q96B97 665 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 DEPDC7Q96QD5 511 aa20.24■□□□□ 0.83
HDAC4-201ENST00000345617 LRRC1Q9BTT6 524 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms