RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 DPP3Q9NY33 737 aa10.35□□□□□ -0.75
RNF41-201ENST00000345093 CAND2O75155 1236 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 LRRN2O75325 713 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 ALDH1A2O94788 518 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 SHMT1P34896 483 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 MAGEA9P43362 315 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 TPI1P60174 286 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 NCOA4Q13772 614 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
RNF41-201ENST00000345093 PGM5Q15124 567 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 CCDC6Q16204 474 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 SRPK1Q96SB4 655 aaKnown RBP10.34□□□□□ -0.75
RNF41-201ENST00000345093 SPON2Q9BUD6 331 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 TMEM8AQ9HCN3 771 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 CNTNAP5Q8WYK1 1306 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 MRC1P22897 1456 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 BCL9LQ86UU0 1499 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 PHF20L1A8MW92 1017 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 CKBP12277 381 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 SULT1E1P49888 294 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 KAZNQ674X7 775 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 SLC27A1Q6PCB7 646 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 FRA10AC1Q70Z53 315 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 SPATA16Q9BXB7 569 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 CACNA1FO60840 1977 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 MYMKA6NI61 221 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 TRIM66O15016 1216 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 CTNNB1P35222 781 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 STX1BP61266 288 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 MRPS6P82932 125 aaKnown RBP10.34□□□□□ -0.75
RNF41-201ENST00000345093 TSNAXIP1Q2TAA8 658 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 SYN2Q92777 582 aaPredicted RBP10.34□□□□□ -0.75
RNF41-201ENST00000345093 HDAC11Q96DB2 347 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNF41-201ENST00000345093 MUC3BQ9H195 1237 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 C11orf49Q9H6J7 331 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 MBL2P11226 248 aaPredicted RBP10.34□□□□□ -0.75
RNF41-201ENST00000345093 YWHAGP61981 247 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNF41-201ENST00000345093 AP1B1Q10567 949 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 WDR72Q3MJ13 1102 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 TATDN1Q6P1N9 297 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 CCDC62Q6P9F0 684 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 RAPH1Q70E73 1250 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 PBXIP1Q96AQ6 731 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 TLR8Q9NR97 1041 aaKnown RBP10.34□□□□□ -0.75
RNF41-201ENST00000345093 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
RNF41-201ENST00000345093 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.33□□□□□ -0.75
RNF41-201ENST00000345093 ARHGAP42A6NI28 874 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 HMGB3O15347 200 aaKnown RBP10.33□□□□□ -0.75
RNF41-201ENST00000345093 ATP1A3P13637 1013 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 GCLMP48507 274 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 DPYDQ12882 1025 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 ZNF177Q13360 481 aaPredicted RBP10.33□□□□□ -0.75
RNF41-201ENST00000345093 CEP85LQ5SZL2 805 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 IRAK1BP1Q5VVH5 260 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 NOP9Q86U38 636 aaKnown RBP10.33□□□□□ -0.75
RNF41-201ENST00000345093 METTL16Q86W50 562 aaKnown RBP10.33□□□□□ -0.75
RNF41-201ENST00000345093 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 CREBZFQ9NS37 354 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 BAG5Q9UL15 447 aa10.33□□□□□ -0.75
RNF41-201ENST00000345093 PRG3Q9Y2Y8 225 aaPredicted RBP10.33□□□□□ -0.75
RNF41-201ENST00000345093 TLL1O43897 1013 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 TOM1L1O75674 476 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 GJB1P08034 283 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 LRIG3Q6UXM1 1119 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 RSAD1Q9HA92 442 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 EPB41L4AQ9HCS5 686 aaPredicted RBP10.33□□□□□ -0.76
RNF41-201ENST00000345093 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 USH1CQ9Y6N9 552 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 CFAP69A5D8W1 941 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 SETSIPP0DME0 302 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 ZNF135P52742 658 aaPredicted RBP10.33□□□□□ -0.76
RNF41-201ENST00000345093 PPP2R5CQ13362 524 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 CDH18Q13634 790 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 E4F1Q66K89 784 aaPredicted RBP10.33□□□□□ -0.76
RNF41-201ENST00000345093 PLPPR4Q7Z2D5 763 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 TRAPPC11Q7Z392 1133 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 LRRC43Q8N309 656 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 C3orf20Q8ND61 904 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.33□□□□□ -0.76
RNF41-201ENST00000345093 HSPH1Q92598 858 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 DEFB118Q96PH6 123 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 CNOT8Q9UFF9 292 aaKnown RBP10.33□□□□□ -0.76
RNF41-201ENST00000345093 SLC13A4Q9UKG4 626 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 C10orf120Q5SQS8 335 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 TRPM4Q8TD43 1214 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 BCAS4Q8TDM0 211 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 SH3KBP1Q96B97 665 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 C18orf8Q96DM3 657 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 HPDLQ96IR7 371 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 SAMD11Q96NU1 681 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 ASB7Q9H672 318 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 DDX20Q9UHI6 824 aaKnown RBP10.33□□□□□ -0.76
RNF41-201ENST00000345093 FAM237AA0A1B0GTK4 181 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
RNF41-201ENST00000345093 SFI1A8K8P3 1242 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms