RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 DNAJB3Q8WWF6 145 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 ELMO3Q96BJ8 720 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 CFHR5Q9BXR6 569 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 PDCL3Q9H2J4 239 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 GTF3C4Q9UKN8 822 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 ANK1P16157 1881 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 TREHO43280 583 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 RPLP2P05387 115 aaKnown RBP27.02■■□□□ 1.92
TRADD-201ENST00000345057 GNA15P30679 374 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 TMEM62Q0P6H9 643 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 OSMRQ99650 979 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 ACP6Q9NPH0 428 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 CTTNBP2NLQ9P2B4 639 aa27.02■■□□□ 1.92
TRADD-201ENST00000345057 ZNF185O15231 689 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 MTA2O94776 668 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 KIF4AO95239 1232 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 MYBL1P10243 752 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 HOXD10P28358 340 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 CRYBB1P53674 252 aaPredicted RBP27.01■■□□□ 1.91
TRADD-201ENST00000345057 TMEM132DQ14C87 1099 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 SLC10A6Q3KNW5 377 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 JADE1Q6IE81 842 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 CCDC70Q6NSX1 233 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 UBR7Q8N806 425 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 PBKQ96KB5 322 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 AMFRQ9UKV5 643 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 DERAQ9Y315 318 aa27.01■■□□□ 1.91
TRADD-201ENST00000345057 NFICP08651 508 aa27■■□□□ 1.91
TRADD-201ENST00000345057 P4HA1P13674 534 aa27■■□□□ 1.91
TRADD-201ENST00000345057 H2AFXP16104 143 aaPredicted RBP27■■□□□ 1.91
TRADD-201ENST00000345057 IRX5P78411 483 aaPredicted RBP27■■□□□ 1.91
TRADD-201ENST00000345057 COG1Q8WTW3 980 aa27■■□□□ 1.91
TRADD-201ENST00000345057 ARHGEF26Q96DR7 871 aa27■■□□□ 1.91
TRADD-201ENST00000345057 XYLT2Q9H1B5 865 aa27■■□□□ 1.91
TRADD-201ENST00000345057 OSGEPQ9NPF4 335 aa27■■□□□ 1.91
TRADD-201ENST00000345057 CREBZFQ9NS37 354 aa27■■□□□ 1.91
TRADD-201ENST00000345057 UVRAGQ9P2Y5 699 aa27■■□□□ 1.91
TRADD-201ENST00000345057 ITGA11Q9UKX5 1188 aa27■■□□□ 1.91
TRADD-201ENST00000345057 TFRCP02786 760 aaKnown RBP27■■□□□ 1.91
TRADD-201ENST00000345057 KRT19P08727 400 aa27■■□□□ 1.91
TRADD-201ENST00000345057 ZNF132P52740 706 aa27■■□□□ 1.91
TRADD-201ENST00000345057 YARSP54577 528 aaKnown RBP27■■□□□ 1.91
TRADD-201ENST00000345057 ZNF667Q5HYK9 610 aa27■■□□□ 1.91
TRADD-201ENST00000345057 C11orf63Q6NUN7 778 aa27■■□□□ 1.91
TRADD-201ENST00000345057 SELENOOQ9BVL4 669 aa27■■□□□ 1.91
TRADD-201ENST00000345057 FAM124BQ9H5Z6 455 aaPredicted RBP27■■□□□ 1.91
TRADD-201ENST00000345057 VRTNQ9H8Y1 702 aa27■■□□□ 1.91
TRADD-201ENST00000345057 UMODL1Q5DID0 1318 aa26.99■■□□□ 1.91
TRADD-201ENST00000345057 AOC2O75106 756 aa26.99■■□□□ 1.91
TRADD-201ENST00000345057 CYP1A2P05177 515 aa26.99■■□□□ 1.91
TRADD-201ENST00000345057 UNGP13051 313 aaPredicted RBP26.99■■□□□ 1.91
TRADD-201ENST00000345057 HOXA11P31270 313 aaPredicted RBP26.99■■□□□ 1.91
TRADD-201ENST00000345057 C1orf127Q8N9H9 656 aa26.99■■□□□ 1.91
TRADD-201ENST00000345057 MSANTD4Q8NCY6 345 aa26.99■■□□□ 1.91
TRADD-201ENST00000345057 BUB1BO60566 1050 aaPredicted RBP26.98■■□□□ 1.91
TRADD-201ENST00000345057 NPTXRO95502 500 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 SNX17Q15036 470 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 RSPH3Q86UC2 560 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 ZNF653Q96CK0 615 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 TRIM6Q9C030 488 aaPredicted RBP26.98■■□□□ 1.91
TRADD-201ENST00000345057 ABCB6Q9NP58 842 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 CISHQ9NSE2 258 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 M0QZ92 97 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 CYP1A1P04798 512 aaPredicted RBP26.98■■□□□ 1.91
TRADD-201ENST00000345057 FGFR4P22455 802 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 CXCR5P32302 372 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 NSFP46459 744 aaKnown RBP26.98■■□□□ 1.91
TRADD-201ENST00000345057 CENPCQ03188 943 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 HIC1Q14526 733 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 FBXO38Q6PIJ6 1188 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 NT5DC3Q86UY8 548 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 STXBP5LQ9Y2K9 1186 aa26.98■■□□□ 1.91
TRADD-201ENST00000345057 THAP12O43422 761 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 ITGB3P05106 788 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 MCM3P25205 808 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 ASPAP45381 313 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 CACNB2Q08289 660 aaPredicted RBP26.97■■□□□ 1.91
TRADD-201ENST00000345057 TSPAN18Q96SJ8 248 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 PSMB7Q99436 277 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 AVENQ9NQS1 362 aaPredicted RBP26.97■■□□□ 1.91
TRADD-201ENST00000345057 GTF2IRD1Q9UHL9 959 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 SIX4Q9UIU6 781 aa26.97■■□□□ 1.91
TRADD-201ENST00000345057 MYADML2A6NDP7 307 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 KCNK3O14649 394 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 STAU1O95793 577 aaKnown RBP26.96■■□□□ 1.91
TRADD-201ENST00000345057 TTC39CQ8N584 583 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 HES6Q96HZ4 224 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 VCPIP1Q96JH7 1222 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 CYP3A43Q9HB55 503 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 CDHR5Q9HBB8 845 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 PDE2AO00408 941 aaPredicted RBP26.96■■□□□ 1.91
TRADD-201ENST00000345057 ZSCAN20P17040 1043 aaPredicted RBP26.96■■□□□ 1.91
TRADD-201ENST00000345057 RBP5P82980 135 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 SPATA4Q8NEY3 305 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 PARD6BQ9BYG5 372 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 BCO2Q9BYV7 579 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 XPNPEP3Q9NQH7 507 aa26.96■■□□□ 1.91
TRADD-201ENST00000345057 PACSIN2Q9UNF0 486 aaPredicted RBP26.96■■□□□ 1.91
TRADD-201ENST00000345057 MMGT1Q8N4V1 131 aa26.95■■□□□ 1.9
TRADD-201ENST00000345057 NOA1Q8NC60 698 aaKnown RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms