RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NIPAL1Q6NVV3 410 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC149Q6ZUS6 474 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RIC3Q7Z5B4 369 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MRPL10Q7Z7H8 261 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 BBS5Q8N3I7 341 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 C12orf66Q96MD2 445 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RPRD1AQ96P16 312 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SCN3BQ9NY72 215 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZFP69BQ9UJL9 534 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GTF2H1P32780 548 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ITGA7Q13683 1181 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FBXW10Q5XX13 1052 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GPAMQ9HCL2 828 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CD300AQ9UGN4 299 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 KDM5BQ9UGL1 1544 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF879B4DU55 563 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ENO2P09104 434 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF3P17036 446 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PLCD1P51178 756 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FIGNQ5HY92 759 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PPP1R36Q96LQ0 422 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MED15Q96RN5 788 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZKSCAN3Q9BRR0 538 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CHMP1AQ9HD42 196 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ING4Q9UNL4 249 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SNAPINO95295 136 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CDC27P30260 824 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RPL10AP62906 217 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 LONP2Q86WA8 852 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 KCT2Q8NC54 265 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RBM42Q9BTD8 480 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ASPSCR1Q9BZE9 553 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SHCBP1LQ9BZQ2 653 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 REV1Q9UBZ9 1251 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PFDN2Q9UHV9 154 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SF3B1O75533 1304 aaKnown RBP eCLIP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC163A0A0D9SF12 145 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 E9PAM4 449 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 HRGP04196 525 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CHRNEQ04844 493 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 BAMBIQ13145 260 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ACAD11Q709F0 780 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 OR7G1Q8NGA0 311 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 OR52K2Q8NGK3 314 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZC3H10Q96K80 434 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 KRIT1O00522 736 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CDC40O60508 579 aaKnown RBP eCLIP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ALOX15P16050 662 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MAPK1P28482 360 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CDK7P50613 346 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TMEM63BQ5T3F8 832 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 KHDRBS2Q5VWX1 349 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SNX31Q8N9S9 440 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GAS2L2Q8NHY3 880 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZFPM2Q8WW38 1151 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PHF21AQ96BD5 680 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZBBXA8MT70 800 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SLC9A1P19634 815 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ABCB5Q2M3G0 1257 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 LIN9Q5TKA1 542 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 VPS37DQ86XT2 251 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZGPATQ8N5A5 531 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CPNE5Q9HCH3 593 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ARHGEF3Q9NR81 526 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MAPRE3Q9UPY8 281 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MUSKO15146 869 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FKBP9O95302 570 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MORF4L2Q15014 288 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RC3H1Q5TC82 1133 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 IQSEC1Q6DN90 963 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MACC1Q6ZN28 852 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SLC39A2Q9NP94 309 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ASMTLO95671 621 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 IFNA8P32881 189 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SOX5P35711 763 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PKN1Q16512 942 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 E4F1Q66K89 784 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 C15orf52Q6ZUT6 534 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 TAGAPQ8N103 731 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SLITRK6Q9H5Y7 841 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 STN1Q9H668 368 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ABCB6Q9NP58 842 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PLCL2Q9UPR0 1127 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 MICAL2O94851 1124 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 HALP42357 657 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 RCAN1P53805 252 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 SSRP1Q08945 709 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 P3H1Q32P28 736 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 WAPLQ7Z5K2 1190 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF285Q96NJ3 590 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GUCA1BQ9UMX6 200 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CPSF1Q10570 1443 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 DHX15O43143 795 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PRKAR1AP10644 381 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 FECHP22830 423 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PKN2Q16513 984 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 GIMAP8Q8ND71 665 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 C19orf18Q8NEA5 215 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PGBD4Q96DM1 585 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms