RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 RIN2Q8WYP3 895 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MFSD14AQ96MC6 490 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 OXCT2Q9BYC2 517 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 DZANK1Q9NVP4 752 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 FAM50BQ9Y247 325 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 UNC80Q8N2C7 3258 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MYO7AQ13402 2215 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GOLGA8IPA6NC78 632 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GOLGA8JA6NMD2 632 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CLIC2O15247 247 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CALUO43852 315 aaPredicted RBP14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PAPLNO95428 1278 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KLRC2P26717 231 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PNPLA4P41247 253 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TFF2Q03403 129 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ENPEPQ07075 957 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MRPL58Q14197 206 aaKnown RBP14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PSMD6Q15008 389 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 EDRF1Q3B7T1 1238 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SMRP1Q8NCR6 262 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 APPL2Q8NEU8 664 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 DPP3Q9NY33 737 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MTRRQ9UBK8 725 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ITGA11Q9UKX5 1188 aa14.15□□□□□ -0.14
HLA-DQA1-201ENST00000343139 C2CD2LO14523 706 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 EXOC3O60645 756 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 IGFBP6P24592 240 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MCM4P33991 863 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CA8P35219 290 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LILRA4P59901 499 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CLDN10P78369 228 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DLX2Q07687 328 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CYP24A1Q07973 514 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ZCWPW2Q504Y3 356 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ANKRD54Q6NXT1 300 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ELMSAN1Q6PJG2 1045 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RTL10Q7L3V2 364 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RHOBTB2Q9BYZ6 727 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PDE11AQ9HCR9 933 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 INTS13Q9NVM9 706 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CD207Q9UJ71 328 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CITO14578 2027 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ATG2AQ2TAZ0 1938 aa14.14□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 H7C4K7 107 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TBC1D4O60343 1298 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 NR3C1P04150 777 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 BMP1P13497 986 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TYMPP19971 482 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RPL13P26373 211 aaKnown RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 BRCC3P46736 316 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CYP2J2P51589 502 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 AP3M2P53677 418 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 WNT7BP56706 349 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TFAMQ00059 246 aaKnown RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SMAD4Q13485 552 aaKnown RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PSMD5Q16401 504 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DUOXA2Q1HG44 320 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CENPPQ6IPU0 288 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SLC8B1Q6J4K2 584 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LILRA6Q6PI73 481 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 FOXR2Q6PJQ5 311 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CEP57Q86XR8 500 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LRRC52Q8N7C0 313 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ANKRD36BP1Q96IX9 119 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 B3GALT6Q96L58 329 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ZNF560Q96MR9 790 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CLSTN3Q9BQT9 956 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PLEKHA4Q9H4M7 779 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 H3BQ06 376 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 OAZ2O95190 189 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GLUD1P00367 558 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TKTP29401 623 aaKnown RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TAF6P49848 677 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ITIH3Q06033 890 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RAB33AQ14088 237 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CYP26C1Q6V0L0 522 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ADSSL1Q8N142 457 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 C1orf127Q8N9H9 656 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TRIML1Q8N9V2 468 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CMASQ8NFW8 434 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 FNBP1Q96RU3 617 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CGRRF1Q99675 332 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 S1PR5Q9H228 398 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LMBRD1Q9NUN5 540 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MAFFQ9ULX9 164 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 BARX2Q9UMQ3 279 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 FRMD4BQ9Y2L6 1034 aa14.13□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TNNC2P02585 160 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CYP11A1P05108 521 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TMEM191BP0C7N4 346 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PRCPP42785 496 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RBP5P82980 135 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms