RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 ITGA4P13612 1032 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 KRT10P13645 584 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 ITIH2P19823 946 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 RBBP5Q15291 538 aaKnown RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 HIBCHQ6NVY1 386 aaPredicted RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 DDX42Q86XP3 938 aaKnown RBP eCLIP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 PGBD4Q96DM1 585 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 TRIM62Q9BVG3 475 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 MTMR12Q9C0I1 747 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 VPS11Q9H270 941 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 UBN1Q9NPG3 1134 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 G3BP2Q9UN86 482 aaKnown RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 APOEP02649 317 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 TGFB3P10600 412 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 SLC8A1P32418 973 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 STX1BP61266 288 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 MED15Q96RN5 788 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 CELF4Q9BZC1 486 aaKnown RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 A0A0G2JND7 137 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 ZBTB39O15060 712 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 MAPK13O15264 365 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 P3H1Q32P28 736 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 ITPRIPL1Q6GPH6 555 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 ZNF449Q6P9G9 518 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 NIPA1Q7RTP0 329 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 C1orf131Q8NDD1 294 aaKnown RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 EPAS1Q99814 870 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 FAM118BQ9BPY3 351 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 TXLNGQ9NUQ3 528 aa16.47■□□□□ 0.23
CARMIL3-201ENST00000342740 GOLGA8QA0A0J9YX86 632 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 GOLGA8OA6NCC3 632 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 GOLGA8NF8WBI6 632 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 CXCL11O14625 94 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 KCNN4O15554 427 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 CPT1AP50416 773 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 C9orf72Q96LT7 481 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 RBM15Q96T37 977 aaKnown RBP eCLIP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 TRIM55Q9BYV6 548 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 FMN2Q9NZ56 1722 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 GTPBP10A4D1E9 387 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 CYP11B1P15538 503 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 SLC26A2P50443 739 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 BYSLQ13895 437 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 SNCBQ16143 134 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 KLC3Q6P597 504 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 CRLF3Q8IUI8 442 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 GPC2Q8N158 579 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 P2RX7Q99572 595 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 SLC38A7Q9NVC3 462 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 ATRNO75882 1429 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 F8VZ95 297 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 FGRP09769 529 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 OAZ1P54368 228 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 LRRC14Q15048 493 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 DBN1Q16643 649 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 SH2D4BQ5SQS7 431 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 BEND6Q5SZJ8 279 aaPredicted RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 JADE1Q6IE81 842 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 WDR75Q8IWA0 830 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 ERP44Q9BS26 406 aa16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 GBA2Q9HCG7 927 aaPredicted RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-201ENST00000342740 TMEM150BA6NC51 233 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 MEIS2O14770 477 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 FOXP2O15409 715 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 APRTP07741 180 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 CYP3A4P08684 503 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 GRIK1P39086 918 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 SULT1E1P49888 294 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 HSD17B4P51659 736 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 STAT4Q14765 748 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 C2CD6Q53TS8 623 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 PDCD6IPQ8WUM4 868 aaKnown RBP16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 ACTR5Q9H9F9 607 aaPredicted RBP16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 FZD1Q9UP38 647 aa16.46■□□□□ 0.22
CARMIL3-201ENST00000342740 PPP1R12AO14974 1030 aaPredicted RBP16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 ZC3H11AO75152 810 aaKnown RBP eCLIP16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 SERPINB6P35237 376 aa16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 ANKMY2Q8IV38 441 aa16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 SH2D3CQ8N5H7 860 aa16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 HAS1Q92839 578 aa16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 RANBP17Q9H2T7 1088 aaKnown RBP16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 MED1Q15648 1581 aaPredicted RBP16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 CST8O60676 142 aa16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 ESRRAP11474 423 aaPredicted RBP16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 NCF2P19878 526 aaPredicted RBP16.45■□□□□ 0.22
CARMIL3-201ENST00000342740 TPI1P60174 286 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms