RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 NCAPHQ15003 741 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 DHX40Q8IX18 779 aaKnown RBP15.77■□□□□ 0.12
UBE3B-202ENST00000342494 ATL2Q8NHH9 583 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 TRIM4Q9C037 500 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 RUBCNLQ9H714 662 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 STX18Q9P2W9 335 aaKnown RBP15.77■□□□□ 0.12
UBE3B-202ENST00000342494 HAUS5O94927 633 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 HLA-DRAP01903 254 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 PNPLA4P41247 253 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 TAF6P49848 677 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 GPRASP2Q96D09 838 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 MAD2L2Q9UI95 211 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 SCOCQ9UIL1 159 aa15.77■□□□□ 0.12
UBE3B-202ENST00000342494 SYCE1LA8MT33 242 aa15.77■□□□□ 0.11
UBE3B-202ENST00000342494 DHX34Q14147 1143 aaKnown RBP15.77■□□□□ 0.11
UBE3B-202ENST00000342494 TDRD10Q5VZ19 366 aaKnown RBP15.77■□□□□ 0.11
UBE3B-202ENST00000342494 NAF1Q96HR8 494 aaKnown RBP15.77■□□□□ 0.11
UBE3B-202ENST00000342494 ABI2Q9NYB9 513 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-202ENST00000342494 ARHGEF40Q8TER5 1519 aa15.77■□□□□ 0.11
UBE3B-202ENST00000342494 PIGHQ14442 188 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-202ENST00000342494 PCSK7Q16549 785 aa15.77■□□□□ 0.11
UBE3B-202ENST00000342494 DCAF6Q58WW2 860 aa15.77■□□□□ 0.11
UBE3B-202ENST00000342494 AGR3Q8TD06 166 aa15.77■□□□□ 0.11
UBE3B-202ENST00000342494 C7orf25Q9BPX7 421 aa15.77■□□□□ 0.11
UBE3B-202ENST00000342494 RNF103-CHMP3A0A140T963 221 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 CCDC78A2IDD5 438 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ARFIP2P53365 341 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 SYCP2LQ5T4T6 812 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ARMC6Q6NXE6 501 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ERO1BQ86YB8 467 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ARHGEF38Q9NXL2 777 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 EPHX2P34913 555 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ZC2HC1CQ53FD0 456 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-202ENST00000342494 PKN3Q6P5Z2 889 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 PATL1Q86TB9 770 aaKnown RBP15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ANKEF1Q9NU02 776 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 GPR182O15218 404 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 EXTL3O43909 919 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ANKMY2Q8IV38 441 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 PTPRN2Q92932 1015 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 TAF1DQ9H5J8 278 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-202ENST00000342494 LMNAP02545 664 aaKnown RBP15.76■□□□□ 0.11
UBE3B-202ENST00000342494 WEE2P0C1S8 567 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 FAM200BP0CF97 657 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ODC1P11926 461 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 UGP2Q16851 508 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ARRDC4Q8NCT1 418 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 TSPAN17Q96FV3 270 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 HPDLQ96IR7 371 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 SELENONQ9NZV5 590 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ADGRG1Q9Y653 693 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 ADGRB3O60242 1522 aa15.76■□□□□ 0.11
UBE3B-202ENST00000342494 PDCLQ13371 301 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 GOLGA7BQ2TAP0 167 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 EFHC1Q5JVL4 640 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 SPDYAQ5MJ70 313 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 C1orf146Q5VVC0 180 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 ARHGAP18Q8N392 663 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 EIF2AQ9BY44 585 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 UNC45AQ9H3U1 944 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 GCLCP48506 637 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 NPEPPSP55786 919 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 RDM1Q8NG50 284 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 NIF3L1Q9GZT8 377 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 RAB6BQ9NRW1 208 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 RRP15Q9Y3B9 282 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 CD163L1Q9NR16 1453 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 FRMD3A2A2Y4 597 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 RSPH10B2B2RC85 870 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 RSPH10BP0C881 870 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 NCAM1P13591 858 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 UBQLN1Q9UMX0 589 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 MAPRE2Q15555 327 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 KIZQ2M2Z5 673 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 GSPT2Q8IYD1 628 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 KRT35Q92764 455 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 DPF3Q92784 378 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 GPR63Q9BZJ6 419 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 TMEM117Q9H0C3 514 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 PKP3Q9Y446 797 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 MYMKA6NI61 221 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 CDH18Q13634 790 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 CYP4A22Q5TCH4 519 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 PTRHD1Q6GMV3 140 aaKnown RBP15.75■□□□□ 0.11
UBE3B-202ENST00000342494 PPP1R2P1Q96PQ5 205 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 HDAC6Q9UBN7 1215 aa15.75■□□□□ 0.11
UBE3B-202ENST00000342494 ICAM1P05362 532 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 GUCY2CP25092 1073 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 CAP2P40123 477 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 BFSP2Q13515 415 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 UBA3Q8TBC4 463 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 TMEM8AQ9HCN3 771 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 ENTPD7Q9NQZ7 604 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 WARS2Q9UGM6 360 aaKnown RBP15.74■□□□□ 0.11
UBE3B-202ENST00000342494 IQSEC2Q5JU85 1478 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 GAS2O43903 313 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms