RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 C6orf222P0C671 652 aaPredicted RBP3.84□□□□□ -1.79
CCDC66-202ENST00000341455 PLA2G4BP0C869 781 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 PLCG1P19174 1290 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 GLRA2P23416 452 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 BEX3Q00994 111 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 LMNB2Q03252 620 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 MCL1Q07820 350 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 LPIN1Q14693 890 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 PTGISQ16647 500 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 L1TD1Q5T7N2 865 aaKnown RBP3.84□□□□□ -1.79
CCDC66-202ENST00000341455 KIAA0319Q5VV43 1072 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 RSPH3Q86UC2 560 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 C7orf31Q8N865 590 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 IQUBQ8NA54 791 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 CNNM3Q8NE01 707 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 SNX29Q8TEQ0 813 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 NXPE3Q969Y0 559 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 CALML4Q96GE6 196 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 TRIM9Q9C026 710 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 INO80BQ9C086 356 aaPredicted RBP3.84□□□□□ -1.79
CCDC66-202ENST00000341455 TMX1Q9H3N1 280 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 GOLPH3LQ9H4A5 285 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 DMAC2Q9NW81 257 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 LRFN2Q9ULH4 789 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 NAP1L2Q9ULW6 460 aaPredicted RBP3.84□□□□□ -1.79
CCDC66-202ENST00000341455 DNM3Q9UQ16 869 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 TNFSF13BQ9Y275 285 aa3.84□□□□□ -1.79
CCDC66-202ENST00000341455 VPS37CA5D8V6 355 aaPredicted RBP3.84□□□□□ -1.8
CCDC66-202ENST00000341455 EIF1AYO14602 144 aaKnown RBP3.84□□□□□ -1.8
CCDC66-202ENST00000341455 EOMESO95936 686 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 PROS1P07225 676 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 PFKFB1P16118 471 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TXLNAP40222 546 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TECP42680 631 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TXKP42681 527 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 MASP1P48740 699 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 CAPSQ13938 189 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TFDP1Q14186 410 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 DCAF4L1Q3SXM0 396 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 UBXN11Q5T124 520 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 ZFYVE27Q5T4F4 411 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 NCAPH2Q6IBW4 605 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 CXCL17Q6UXB2 119 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 KRBA2Q6ZNG9 492 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 PGBD3Q8N328 593 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 LILRB2Q8N423 598 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TMEM161BQ8NDZ6 487 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 LINC01599Q8WXQ3 324 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 RIPOR3Q96MK2 946 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 NECTIN4Q96NY8 510 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 GSDMAQ96QA5 445 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 UBN1Q9NPG3 1134 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 GEMIN8Q9NWZ8 242 aaKnown RBP3.84□□□□□ -1.8
CCDC66-202ENST00000341455 FAM13BQ9NYF5 915 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TRAF3IP3Q9Y228 551 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 DAAM1Q9Y4D1 1078 aa3.84□□□□□ -1.8
CCDC66-202ENST00000341455 DDX49Q9Y6V7 483 aaKnown RBP3.84□□□□□ -1.8
CCDC66-202ENST00000341455 TTC3P53804 2025 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 EVPLQ92817 2033 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 A0A1B0GUA9 196 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 HMGB1P1B2RPK0 211 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 C9IYK1 514 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ACKR2O00590 384 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 TBC1D4O60343 1298 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 NBNO60934 754 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 MCF2P10911 925 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 CYP3A5P20815 502 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 GARTP22102 1010 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 CCT6AP40227 531 aaKnown RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 MLLT6P55198 1093 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 GUCY1B3Q02153 619 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 LAMTOR4Q0VGL1 99 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 LONRF3Q496Y0 759 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 WDR78Q5VTH9 848 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 CMTR2Q8IYT2 770 aaKnown RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 VWA5B2Q8N398 1253 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 SMRP1Q8NCR6 262 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ASAP3Q8TDY4 903 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 HNRNPLLQ8WVV9 542 aaKnown RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PIBF1Q8WXW3 757 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ITPKCQ96DU7 683 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PAGE5Q96GU1 130 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 RUSC1Q9BVN2 902 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 OSBPL7Q9BZF2 842 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 CLSTN2Q9H4D0 955 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ZFAND3Q9H8U3 227 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PLEKHA5Q9HAU0 1116 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 DDX19AQ9NUU7 478 aaKnown RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PRMT7Q9NVM4 692 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 CD207Q9UJ71 328 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 KCNH3Q9ULD8 1083 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 NR2E1Q9Y466 385 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PLXND1Q9Y4D7 1925 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 VWA3AA6NCI4 1184 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 EPOPA6NHQ4 379 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 MYMKA6NI61 221 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 N4BP3O15049 544 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 TSPAN1O60635 241 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 MBD3O95983 291 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms