RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GOLGA6L7A0A1B0GV03 622 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 NOMO3P69849 1222 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 CAV1Q03135 178 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 CUL2Q13617 745 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 C2CD6Q53TS8 623 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 ANKRD20A8PQ5CZ79 823 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 SPOPLQ6IQ16 392 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 LLGL2Q6P1M3 1020 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 SAMD7Q7Z3H4 446 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 ZKSCAN4Q969J2 545 aaPredicted RBP15.5■□□□□ 0.07
TDP2-201ENST00000341060 DDX23Q9BUQ8 820 aaKnown RBP15.5■□□□□ 0.07
TDP2-201ENST00000341060 TEX13BQ9BXU2 312 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 HAPLN2Q9GZV7 340 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 MAF1Q9H063 256 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 PORCNQ9H237 461 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 HOMER3Q9NSC5 361 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 PTPRFP10586 1907 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 ASAP2O43150 1006 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 ACSL3O95573 720 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 NAMPTP43490 491 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 LIN9Q5TKA1 542 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 SLFN12LQ6IEE8 588 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 MICALL2Q8IY33 904 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 ATL2Q8NHH9 583 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 TRAIPQ9BWF2 469 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 DHX33Q9H6R0 707 aaKnown RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 MRPL47Q9HD33 250 aaKnown RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 PICK1Q9NRD5 415 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 RBAKQ9NYW8 714 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 CNTN6Q9UQ52 1028 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 MAFBQ9Y5Q3 323 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 FZD9O00144 591 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 TTC4O95801 387 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 LDHAP00338 332 aaKnown RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 ATP4AP20648 1035 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 GNA15P30679 374 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 CHKAP35790 457 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 ITGA8P53708 1063 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 LONRF1Q17RB8 773 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 SPRED3Q2MJR0 410 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 LACTB2Q53H82 288 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 TMEM270Q6UE05 265 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 PHLDB2Q86SQ0 1253 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 PHF13Q86YI8 300 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 CCDC50Q8IVM0 306 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 ABRAQ8N0Z2 381 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 CCT6BQ92526 530 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 TMEM143Q96AN5 459 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 WRNIP1Q96S55 665 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 PRMT1Q99873 361 aaKnown RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 C11orf70Q9BRQ4 267 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 ADAM22Q9P0K1 906 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 R3HDM2Q9Y2K5 976 aaKnown RBP15.49■□□□□ 0.07
TDP2-201ENST00000341060 NEU2Q9Y3R4 380 aa15.49■□□□□ 0.07
TDP2-201ENST00000341060 C19orf81C9J6K1 198 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 DNM1LO00429 736 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 SORBS3O60504 671 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 ATG7O95352 703 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 OATP04181 439 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 CFHP08603 1231 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 RALAP11233 206 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 ATF2P15336 505 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 YBX3P16989 372 aaKnown RBP eCLIP15.48■□□□□ 0.07
TDP2-201ENST00000341060 GLRA2P23416 452 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 TBXAS1P24557 533 aaPredicted RBP15.48■□□□□ 0.07
TDP2-201ENST00000341060 SP2Q02086 613 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 DAB2IPQ5VWQ8 1189 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 PLEKHA7Q6IQ23 1121 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 PPP1R2P3Q6NXS1 205 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 PIGWQ7Z7B1 504 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 EXOC3L1Q86VI1 746 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 KATNAL2Q8IYT4 538 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 ANKS4BQ8N8V4 417 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 CCDC197Q8NCU1 140 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 ZNF526Q8TF50 670 aaPredicted RBP15.48■□□□□ 0.07
TDP2-201ENST00000341060 CCDC114Q96M63 670 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 CGRRF1Q99675 332 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 ZNF302Q9NR11 478 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 SCINQ9Y6U3 715 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 ZNF541Q9H0D2 1346 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 MGAMO43451 1857 aa15.48■□□□□ 0.07
TDP2-201ENST00000341060 LRRIQ4A6NIV6 560 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 VGLL3A8MV65 326 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 K7ERI5 159 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 O00370 1275 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 CLTAP09496 248 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 POTEJP0CG39 1038 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ATP5DP30049 168 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 NOP14P78316 857 aaKnown RBP15.47■□□□□ 0.07
TDP2-201ENST00000341060 CNGA2Q16280 664 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 CCNG2Q16589 344 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms