RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 FAM124BQ9H5Z6 455 aaPredicted RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 GPRC5CQ9NQ84 441 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 PLAAQ9Y263 795 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 ARAP2Q8WZ64 1704 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 TROVE2P10155 538 aaKnown RBP eCLIP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 PRAMEF18Q5VWM3 479 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 LBX2Q6XYB7 198 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 SDCCAG8Q86SQ7 713 aaPredicted RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 CCDC13Q8IYE1 715 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 TMEM161BQ8NDZ6 487 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 FAM149B1Q96BN6 582 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 CDCA5Q96FF9 252 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 ATP6V1G3Q96LB4 118 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 CPSF3Q9UKF6 684 aaKnown RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 SNX24Q9Y343 169 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 ASTN2O75129 1339 aaPredicted RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 I3L4J1 428 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 M0QYV0 167 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 FZD9O00144 591 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 TNPO2O14787 897 aaKnown RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 VGLL4Q14135 290 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 APTXQ7Z2E3 356 aaKnown RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 ZFYVE28Q9HCC9 887 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 UBQLN1Q9UMX0 589 aaKnown RBP8.05□□□□□ -1.12
HIPK1-201ENST00000340480 RPTORQ8N122 1335 aa8.05□□□□□ -1.12
HIPK1-201ENST00000340480 ACADSBP45954 432 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 NOTUMQ6P988 496 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ZNF410Q86VK4 478 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KIF12Q96FN5 646 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 P2RX7Q99572 595 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 GBA2Q9HCG7 927 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 PTPN22Q9Y2R2 807 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 NCANO14594 1321 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TTC36A6NLP5 189 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 VPS41P49754 854 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 RASSF2P50749 326 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 PMS2P54278 862 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 CDKL3Q8IVW4 592 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SKA2Q8WVK7 121 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 CHMP6Q96FZ7 201 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ERP44Q9BS26 406 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 CALN1Q9BXU9 219 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TMEM51Q9NW97 253 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 BAG5Q9UL15 447 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TGFB1I1O43294 461 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ZBED1O96006 694 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 COMTP21964 271 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 UBA1P22314 1058 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 COPS2P61201 443 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SREBF2Q12772 1141 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 BYSLQ13895 437 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SH3D19Q5HYK7 790 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 AGBL2Q5U5Z8 902 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KAZNQ674X7 775 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TAS1R2Q8TE23 839 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 STMN2Q93045 179 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 CAVIN3Q969G5 261 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 LENG9Q96B70 501 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 GLIS2Q9BZE0 524 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KLC2Q9H0B6 622 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KLHL14Q9P2G3 628 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 MYL3P08590 195 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 RGS2P41220 211 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ITGB3BPQ13352 177 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KRT33BQ14525 404 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KLHL38Q2WGJ6 581 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SPDYCQ5MJ68 293 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 N4BP2L2Q92802 583 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 APOL6Q9BWW8 343 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 NT5C1AQ9BXI3 368 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TLR10Q9BXR5 811 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ZC3H4Q9UPT8 1303 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 AKAP11Q9UKA4 1901 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 KCNMA1Q12791 1236 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TWF2Q6IBS0 349 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SLC13A5Q86YT5 568 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 FEZF2Q8TBJ5 459 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SHC3Q92529 594 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 LBHD1Q9BQE6 289 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SH2D3AQ9BRG2 576 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 FUT8Q9BYC5 575 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 VCX3BQ9H321 246 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ABHD16BQ9H3Z7 469 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 LAMB2P55268 1798 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 PPARGP37231 505 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 GGCXP38435 758 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 GARSP41250 739 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 SPIRE1Q08AE8 756 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 RBBP5Q15291 538 aaKnown RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 OPTNQ96CV9 577 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 TSPAN18Q96SJ8 248 aa8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ROPN1BQ9BZX4 212 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 ROPN1Q9HAT0 212 aaPredicted RBP8.04□□□□□ -1.12
HIPK1-201ENST00000340480 AXLP30530 894 aa8.03□□□□□ -1.12
HIPK1-201ENST00000340480 CASP5P51878 434 aa8.03□□□□□ -1.12
HIPK1-201ENST00000340480 IFRD2Q12894 506 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms