RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 C11orf16Q9NQ32 467 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 PANK4Q9NVE7 773 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 ATP6V1DQ9Y5K8 247 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 VWA8A3KMH1 1905 aa14.5□□□□□ -0.09
SIRPB3P-201ENST00000340424 C2CD4DB7Z1M9 353 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 H7C4K7 107 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZMYND10O75800 440 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 GCNT3O95395 438 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 WEE2P0C1S8 567 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 TKTP29401 623 aaKnown RBP14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 MCM4P33991 863 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 TNFSF9P41273 254 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 SLC8B1Q6J4K2 584 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 SHC4Q6S5L8 630 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 UBALD2Q8IYN6 164 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 BEST2Q8NFU1 509 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 POMGNT1Q8WZA1 660 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 SMG7Q92540 1137 aaKnown RBP14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 PRKD2Q9BZL6 878 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 TUBGCP4Q9UGJ1 667 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 CDH22Q9UJ99 828 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 RCOR1Q9UKL0 485 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 AGO2Q9UKV8 859 aaKnown RBP14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 MAFFQ9ULX9 164 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 C2CD2Q9Y426 696 aa14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 ARIH1Q9Y4X5 557 aaPredicted RBP14.49□□□□□ -0.09
SIRPB3P-201ENST00000340424 CLUHO75153 1309 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 ARHGEF37A1IGU5 675 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 LACTBL1A8MY62 500 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 ANKRD63C9JTQ0 380 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 KIAA0391O15091 583 aaKnown RBP14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 XYLBO75191 536 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 IL18RAPO95256 599 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 LDHAP00338 332 aaKnown RBP14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 COL9A1P20849 921 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 GARTP22102 1010 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 OR1D2P34982 312 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 BRCC3P46736 316 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 AARSP49588 968 aaKnown RBP eCLIP14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 KRT85P78386 507 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZXDAP98168 799 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 DNM1Q05193 864 aaKnown RBP14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 MTMR3Q13615 1198 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 PKP1Q13835 747 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 BECN1Q14457 450 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 VARS2Q5ST30 1063 aaKnown RBP14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 IER5LQ5T953 404 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 SPATA1Q5VX52 437 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 RESP18Q5W5W9 173 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 KANK3Q6NY19 840 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 NT5DC4Q86YG4 428 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 GLYCTKQ8IVS8 523 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 DHX58Q96C10 678 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZNF707Q96C28 371 aaPredicted RBP14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 TRIM9Q9C026 710 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 PIDD1Q9HB75 910 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 PCDHA7Q9UN72 937 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 SORCS3Q9UPU3 1222 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 HCN4Q9Y3Q4 1203 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 CDY1Q9Y6F8 540 aa14.48□□□□□ -0.09
SIRPB3P-201ENST00000340424 C2orf16Q68DN1 1984 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 M0QZQ0 153 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 RFPL2O75678 378 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 C8AP07357 584 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 SPATA31D3P0C874 917 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 SIGLEC14Q08ET2 396 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 MRPL58Q14197 206 aaKnown RBP14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 TMEM132DQ14C87 1099 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 FOXD4L6Q3SYB3 417 aaPredicted RBP14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 PPM1LQ5SGD2 360 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZBTB41Q5SVQ8 909 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZNF280DQ6N043 979 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 FOXD4L3Q6VB84 417 aaPredicted RBP14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 TRIM67Q6ZTA4 783 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 SPATA31D4Q6ZUB0 917 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 BMP8AQ7Z5Y6 402 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 SYCP3Q8IZU3 236 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZNF461Q8TAF7 563 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 C7orf25Q9BPX7 421 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 TBC1D7Q9P0N9 293 aa14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 ZFP37Q9Y6Q3 630 aaPredicted RBP14.47□□□□□ -0.09
SIRPB3P-201ENST00000340424 UBE4BO95155 1302 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 FAM86C2PA6NEL3 165 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 I3L4J1 428 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 EIF3DO15371 548 aaKnown RBP eCLIP14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 POLR2DO15514 142 aaKnown RBP14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 ADAM12O43184 909 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 TBC1D4O60343 1298 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 MYBP10242 640 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 IGFBP6P24592 240 aaPredicted RBP14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 ADSSP30520 456 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 ACOT2P49753 483 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 ASIC1P78348 528 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 TPGS2Q68CL5 300 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 JADE1Q6IE81 842 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 CEP57L1Q8IYX8 460 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 MFSD14AQ96MC6 490 aa14.46□□□□□ -0.09
SIRPB3P-201ENST00000340424 USP25Q9UHP3 1055 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms