RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 CISHQ9NSE2 258 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 PARP2Q9UGN5 583 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 KIF13BQ9NQT8 1826 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 STAG3L1P0CL83 205 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 POLR2BP30876 1174 aaKnown RBP10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 SLCO1A2P46721 670 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 RGS7P49802 495 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 EFNA5P52803 228 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 EMC1Q8N766 993 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 CDT1Q9H211 546 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 FAM49BQ9NUQ9 324 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 PCSK1NQ9UHG2 260 aa10.85□□□□□ -0.67
RBFOX1-202ENST00000340209 GOLGA6L10A6NI86 522 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 GPR25O00155 361 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 MSCO60682 206 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 IFNB1P01574 187 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 RFX1P22670 979 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 AKAP5P24588 427 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 FLT3P36888 993 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 FMNL3Q8IVF7 1028 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 EFCAB13Q8IY85 973 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 TJP2Q9UDY2 1190 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 NPTXRO95502 500 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 C4BPAP04003 597 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 SMPD1P17405 629 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 EDNRBP24530 442 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 TUBB4BP68371 445 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ADCY1Q08828 1119 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ZNF667Q5HYK9 610 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 JADE1Q6IE81 842 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 MPZL3Q6UWV2 235 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 AFAP1L1Q8TED9 768 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ARL8AQ96BM9 186 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 HEXIM2Q96MH2 286 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 NIFKQ9BYG3 293 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 SMYD3Q9H7B4 428 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 SYNJ2BP-COX16A0A087WUM0 186 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 LACTBL1A8MY62 500 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 KRT10P13645 584 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 CTNNA2P26232 953 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 RPL7AP62424 266 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 TNFAIP2Q03169 654 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ARHGAP1Q07960 439 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 CLEC16AQ2KHT3 1053 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 SGO2Q562F6 1265 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 KCNT1Q5JUK3 1230 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 DNAJC24Q6P3W2 148 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ADPGKQ9BRR6 497 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 NEUROG2Q9H2A3 272 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 COX16Q9P0S2 106 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 DAAM1Q9Y4D1 1078 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 CEP83Q9Y592 693 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ATG7O95352 703 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 GRIK4Q16099 956 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 PLEKHH3Q7Z736 793 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 BRSK2Q8IWQ3 736 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ZIM3Q96PE6 472 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 PTPN18Q99952 460 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
RBFOX1-202ENST00000340209 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 TARSL2A2RTX5 802 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 MAP3K6O95382 1288 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 C6orf222P0C671 652 aaPredicted RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 PRLRP16471 622 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 MOGSQ13724 837 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 LAMC2Q13753 1193 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 PARK7Q99497 189 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 ADAM33Q9BZ11 813 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 C10orf88Q9H8K7 445 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 HMGXB4Q9UGU5 601 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 TTC7AQ9ULT0 858 aaPredicted RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 PLAAQ9Y263 795 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 YARSP54577 528 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 RWDD2BP57060 319 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 GABPB1Q06547 395 aaPredicted RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 CCDC137Q6PK04 289 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 ZNF606Q8WXB4 792 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 MTUS1Q9ULD2 1270 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 PIN4Q9Y237 131 aaKnown RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 LRRD1A4D1F6 860 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 ZBTB42B2RXF5 422 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 MAP2K7O14733 419 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 TCF4P15884 667 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 ARF4P18085 180 aaPredicted RBP10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 SCYL2Q6P3W7 929 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 MCOLN2Q8IZK6 566 aa10.83□□□□□ -0.68
RBFOX1-202ENST00000340209 CCDC33Q8N5R6 958 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms