RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PDE6CP51160 858 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 CDR2Q01850 454 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 ITGA7Q13683 1181 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 PTGISQ16647 500 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 TRIM58Q8NG06 486 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 TACC1O75410 805 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 TFRCP02786 760 aaKnown RBP22.73■■□□□ 1.23
VRK2-201ENST00000340157 KRT19P08727 400 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 PRMT2P55345 433 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 TMEM270Q6UE05 265 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 ALKAL1Q6UXT8 129 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 APBB1IPQ7Z5R6 666 aaPredicted RBP22.73■■□□□ 1.23
VRK2-201ENST00000340157 NOX5Q96PH1 765 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 HMX1Q9NP08 348 aaPredicted RBP22.73■■□□□ 1.23
VRK2-201ENST00000340157 POLIQ9UNA4 740 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 TRIM17Q9Y577 477 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 PCDHB4Q9Y5E5 795 aa22.73■■□□□ 1.23
VRK2-201ENST00000340157 CTIFO43310 598 aaKnown RBP22.72■■□□□ 1.23
VRK2-201ENST00000340157 RECQL4O94761 1208 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 CLSTN1O94985 981 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 ZNF132P52740 706 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 CD302Q8IX05 232 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 ISCUQ9H1K1 167 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 RNF39Q9H2S5 420 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 PLEKHA5Q9HAU0 1116 aa22.72■■□□□ 1.23
VRK2-201ENST00000340157 TRMT13Q9NUP7 481 aaKnown RBP22.72■■□□□ 1.23
VRK2-201ENST00000340157 NCANO14594 1321 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 M0QZ92 97 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 CABYRO75952 493 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 ARHGEF6Q15052 776 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 RSPH3Q86UC2 560 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 RBBP8NLQ8NC74 664 aaPredicted RBP22.71■■□□□ 1.23
VRK2-201ENST00000340157 TSC1Q92574 1164 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 KIF12Q96FN5 646 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 PCDHB2Q9Y5E7 798 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 PCDHGC5Q9Y5F6 944 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 TMEM253P0C7T8 217 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 AKAP5P24588 427 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 POLR2BP30876 1174 aaKnown RBP22.71■■□□□ 1.23
VRK2-201ENST00000340157 ZBTB6Q15916 424 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 TRIM71Q2Q1W2 868 aaKnown RBP22.71■■□□□ 1.23
VRK2-201ENST00000340157 PAPD7Q5XG87 772 aaKnown RBP22.71■■□□□ 1.23
VRK2-201ENST00000340157 SCARA5Q6ZMJ2 495 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 NT5DC4Q86YG4 428 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 SMG8Q8ND04 991 aaKnown RBP22.71■■□□□ 1.23
VRK2-201ENST00000340157 SH3TC2Q8TF17 1288 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 ARHGEF26Q96DR7 871 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 TRIM6Q9C030 488 aaPredicted RBP22.71■■□□□ 1.23
VRK2-201ENST00000340157 THAP2Q9H0W7 228 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 RNF19AQ9NV58 838 aa22.71■■□□□ 1.23
VRK2-201ENST00000340157 ANO9A1A5B4 782 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 GRID2IPA4D2P6 1211 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 SLU7O95391 586 aaKnown RBP22.7■■□□□ 1.22
VRK2-201ENST00000340157 FTLP02792 175 aaPredicted RBP22.7■■□□□ 1.22
VRK2-201ENST00000340157 THPOP40225 353 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 TAF4BQ92750 862 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 APOL6Q9BWW8 343 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 VRTNQ9H8Y1 702 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 AGO3Q9H9G7 860 aaKnown RBP22.7■■□□□ 1.22
VRK2-201ENST00000340157 CISHQ9NSE2 258 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 DPP3Q9NY33 737 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 CNTN3Q9P232 1028 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 CDC23Q9UJX2 597 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 ST3GAL5Q9UNP4 418 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 IPPQ9Y573 584 aa22.7■■□□□ 1.22
VRK2-201ENST00000340157 A0A0A6YYK5 440 aaPredicted RBP22.69■■□□□ 1.22
VRK2-201ENST00000340157 MOXD2PA6NHM9 499 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 PALMO75781 387 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 CFHP08603 1231 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 WEE2P0C1S8 567 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 GZMAP12544 262 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 ABCB4P21439 1286 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 ALS2CR12Q96Q35 445 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 TSEN34Q9BSV6 310 aaKnown RBP22.69■■□□□ 1.22
VRK2-201ENST00000340157 BCO2Q9BYV7 579 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 SDCBP2Q9H190 292 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 NXF1Q9UBU9 619 aaKnown RBP22.69■■□□□ 1.22
VRK2-201ENST00000340157 ITGA11Q9UKX5 1188 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 DERAQ9Y315 318 aa22.69■■□□□ 1.22
VRK2-201ENST00000340157 ANKRD62A6NC57 917 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 RPS6KA5O75582 802 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 CD58P19256 250 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 NAP1L1P55209 391 aaKnown RBP22.68■■□□□ 1.22
VRK2-201ENST00000340157 GLRA4Q5JXX5 417 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 ARRDC4Q8NCT1 418 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 CARD6Q9BX69 1037 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 TUBGCP4Q9UGJ1 667 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 AGAP1Q9UPQ3 857 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 JRKLQ9Y4A0 524 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 A0A1W2PQ45 241 aaPredicted RBP22.68■■□□□ 1.22
VRK2-201ENST00000340157 A0A1W2PQY0 241 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 RTN2O75298 545 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 RAP1GAPP47736 663 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 YARSP54577 528 aaKnown RBP22.68■■□□□ 1.22
VRK2-201ENST00000340157 BPIFB4P59827 614 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 PTK7Q13308 1070 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 WDR72Q3MJ13 1102 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 XKR4Q5GH76 650 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 ZNF667Q5HYK9 610 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 C18orf25Q96B23 403 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms