RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CNOT7Q9UIV1 285 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 COL4A1P02462 1669 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 OPHN1O60890 802 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 AP1G2O75843 785 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 P4HBP07237 508 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 SNHG28P0DPA3 235 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 PECAM1P16284 738 aaPredicted RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 HSPA1LP34931 641 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 EFTUD2Q15029 972 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 WLSQ5T9L3 541 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 C3orf62Q6ZUJ4 267 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 NLRP9Q7RTR0 991 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 EIF1ADQ8N9N8 165 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 CENPTQ96BT3 561 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 GBP5Q96PP8 586 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 TBC1D10AQ9BXI6 508 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 MYH1P12882 1939 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 MYH4Q9Y623 1939 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ATXN2Q99700 1313 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 HAUS5O94927 633 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 PPP2R5CQ13362 524 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 ACAD10Q6JQN1 1059 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 DNAJC24Q6P3W2 148 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 CENPUQ71F23 418 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 CCDC125Q86Z20 511 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 RFX6Q8HWS3 928 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 RHOT1Q8IXI2 618 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 GLIS1Q8NBF1 620 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 PRMT6Q96LA8 375 aaPredicted RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 RPS6KC1Q96S38 1066 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 MAK16Q9BXY0 300 aaKnown RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 ZNF341Q9BYN7 854 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 GLIS2Q9BZE0 524 aaPredicted RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 GABBR1Q9UBS5 961 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 SEL1LQ9UBV2 794 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 PCYOX1Q9UHG3 505 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 STK24Q9Y6E0 443 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 LUC7L3O95232 432 aaKnown RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 INHBAP08476 426 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 PAEPP09466 180 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 Q4G0T1 1027 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 SWSAP1Q6NVH7 229 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 PPM1NQ8N819 430 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 IL31RAQ8NI17 732 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 DNAJC9Q8WXX5 260 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 TMEM143Q96AN5 459 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 DCLK3Q9C098 648 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 A1CFQ9NQ94 594 aaKnown RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 NYAP2Q9P242 653 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 SLC12A4Q9UP95 1085 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 NCANO14594 1321 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 DCTN3O75935 186 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 EPHB1P54762 984 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 TFAMQ00059 246 aaKnown RBP14.96□□□□□ -0.01
PCDH8-201ENST00000338862 BTNL9Q6UXG8 535 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 LRRC6Q86X45 466 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 CYP4F11Q9HBI6 524 aa14.96□□□□□ -0.01
PCDH8-201ENST00000338862 H7C0C1 242 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 ANXA13P27216 316 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 RFC5P40937 340 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 ATP5OP48047 213 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 ARFIP2P53365 341 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 TAS2R40P59535 323 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 C1orf131Q8NDD1 294 aaKnown RBP14.95□□□□□ -0.02
PCDH8-201ENST00000338862 AGR3Q8TD06 166 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 MAGEB18Q96M61 343 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 HERPUD2Q9BSE4 406 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 TRIM4Q9C037 500 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 VCXQ9H320 206 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 FBXO6Q9NRD1 293 aaPredicted RBP14.95□□□□□ -0.02
PCDH8-201ENST00000338862 hCG_2014768A0A024R1R8 64 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 CAPN9O14815 690 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 NRLP54845 237 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 JAG1P78504 1218 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 TRPC3Q13507 836 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 TFDP1Q14186 410 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 STAT4Q14765 748 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 KIF22Q14807 665 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 C11orf63Q6NUN7 778 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 FAM111AQ96PZ2 611 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 UVRAGQ9P2Y5 699 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 GGPS1O95749 300 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 TAC1P20366 129 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 DLGAP5Q15398 846 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 MIS18BP1Q6P0N0 1132 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 RMDN3Q96TC7 470 aa14.95□□□□□ -0.02
PCDH8-201ENST00000338862 CFHP08603 1231 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 GNAT1P11488 350 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 BRD2P25440 801 aaKnown RBP14.94□□□□□ -0.02
PCDH8-201ENST00000338862 PEX5P50542 639 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
PCDH8-201ENST00000338862 RPL7AP62424 266 aaKnown RBP14.94□□□□□ -0.02
PCDH8-201ENST00000338862 BNIP1Q12981 228 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 DEPTORQ8TB45 409 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 TRIM55Q9BYV6 548 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 GPR88Q9GZN0 384 aa14.94□□□□□ -0.02
PCDH8-201ENST00000338862 HEY1Q9Y5J3 304 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms