RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCT8L2Q96SF2 557 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 SENP7Q9BQF6 1050 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 AVENQ9NQS1 362 aaPredicted RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
RTN3-201ENST00000338850 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
RTN3-201ENST00000338850 LRRC37A2A6NM11 1700 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 GMNCA6NCL1 334 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 H0YCG3 227 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ARVCFO00192 962 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 NFIBO00712 420 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 AGTP01019 485 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ARP10275 920 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 GHRP10912 638 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ITGA4P13612 1032 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 SMPD1P17405 629 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 MXI1P50539 228 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 PEX5P50542 639 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 CYP2J2P51589 502 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 MRPS25P82663 173 aaKnown RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 SMAD3P84022 425 aaKnown RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 KRT76Q01546 638 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 PTP4A2Q12974 167 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 ENOX2Q16206 610 aaKnown RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 TAPT1Q6NXT6 567 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 GJB7Q6PEY0 223 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 TLK2Q86UE8 772 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 PACS2Q86VP3 889 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ZNF677Q86XU0 584 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 MAP4K3Q8IVH8 894 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 FBXO16Q8IX29 292 aaPredicted RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 EPS8L1Q8TE68 723 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ARHGEF26Q96DR7 871 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 TRIM11Q96F44 468 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 AP1M1Q9BXS5 423 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ROPN1BQ9BZX4 212 aaPredicted RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 THAP2Q9H0W7 228 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ROPN1Q9HAT0 212 aaPredicted RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 AGO4Q9HCK5 861 aaKnown RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 TMEM8AQ9HCN3 771 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 VTA1Q9NP79 307 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 PDGFCQ9NRA1 345 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 WRAP73Q9P2S5 460 aaPredicted RBP11.53□□□□□ -0.56
RTN3-201ENST00000338850 MTUS1Q9ULD2 1270 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 PCDHA3Q9Y5H8 950 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 ALG6Q9Y672 507 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 MROH7Q68CQ1 1323 aa11.53□□□□□ -0.56
RTN3-201ENST00000338850 CUL9Q8IWT3 2517 aa11.52□□□□□ -0.56
RTN3-201ENST00000338850 COL6A3P12111 3177 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 FOXN3O00409 490 aaPredicted RBP11.52□□□□□ -0.57
RTN3-201ENST00000338850 MAFGO15525 162 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 TIMP1P01033 207 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 TRIM49P0CI25 452 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 TRIM49CP0CI26 452 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 MYBL1P10243 752 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 ITGB5P18084 799 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 MMP13P45452 471 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 DNA2P51530 1060 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 MFAP3P55082 362 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 GUCY1A3Q02108 690 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 GCNT1Q02742 428 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 TRADDQ15628 312 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 ZNF568Q3ZCX4 644 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 LACTB2Q53H82 288 aaPredicted RBP11.52□□□□□ -0.57
RTN3-201ENST00000338850 TMEM63BQ5T3F8 832 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 ZNF697Q5TEC3 545 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 ICE2Q659A1 982 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 KCTD16Q68DU8 428 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 KRT39Q6A163 491 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 IQSEC1Q6DN90 963 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 ZDHHC24Q6UX98 284 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 SLC30A10Q6XR72 485 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 CEP128Q6ZU80 1094 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 EEPD1Q7L9B9 569 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 OTUD6BQ8N6M0 293 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 SLC43A3Q8NBI5 491 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 UBLCP1Q8WVY7 318 aaPredicted RBP11.52□□□□□ -0.57
RTN3-201ENST00000338850 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 ALG3Q92685 438 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 TATDN2Q93075 761 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 NTPCRQ9BSD7 190 aaKnown RBP11.52□□□□□ -0.57
RTN3-201ENST00000338850 TACO1Q9BSH4 297 aaKnown RBP11.52□□□□□ -0.57
RTN3-201ENST00000338850 AP5M1Q9H0R1 490 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 EPB41L4BQ9H329 900 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 GOLPH3Q9H4A6 298 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 LRRC19Q9H756 370 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 HSPBP1Q9NZL4 362 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 COG5Q9UP83 839 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 LCTP09848 1927 aa11.52□□□□□ -0.57
RTN3-201ENST00000338850 KIAA1217Q5T5P2 1943 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms